Job Description Q06124 Confidence 100.00% Date Wed May 9 17:40:46 BST 2012 Rank 6 Aligned Residues 339 % Identity 31% Template c1yguA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:leukocyte common antigen; PDBTitle: crystal structure of the tandem phosphatase domains of rptp2 cd45 with a ptyr peptide Resolution 2.90 Å

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		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	P	L	N	T	T	R	I	N	A	A	E	I	E	S	R	V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	Q	G	F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N	K	N	K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L
Query Conservation
Alig confidence																												.	.	.	.	.	.																	.	.
Template Conservation																												.	.	.	.	.	.																	.	.
Template Sequence		K	Q	L	X	N	V	E	P	I	H	A	D	I	L	L	E	T	Y	K	R	K	I	A	D	E	G	.	.	.	.	.	.	R	P	F	L	A	E	F	Q	S	I	P	R	V	F	S	K	.	.	F	P	I	K	E	A	R	K	P	F	N	Q	N	K	N	R	Y	V	D	I	L	P	Y	D	Y	N	R	V	E	L
Template Known Secondary structure																												.	.	.	.	.	.										S		S	S		S	S	.	.	S				S	T	T	S	G	G	G	S	T	T		S		T	T					T	T	T	B
Template Predicted Secondary structure																												.	.	.	.	.	.																	.	.
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.							.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.			.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	G	D	P	N	E	P	V	S	D	Y	I	N	A	N	I	I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S	Y	I	A	T	Q	G	C	L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P
Query Conservation
Alig confidence						.																			.	.	.	.	.	.	.	.
Template Conservation						.																			.	.	.	.	.	.	.	.
Template Sequence		S	E	I	N	.	G	D	A	G	S	N	Y	I	N	A	S	Y	I	D	G	F	K	E	.	.	.	.	.	.	.	.	P	R	K	Y	I	A	A	Q	G	P	R	D	E	T	V	D	D	F	W	R	X	I	W	E	Q	K	A	T	V	I	V	X	V	T	R	C	E	E	G	N	R	N	K	C	A	E	Y	W	P
Template Known Secondary structure					T	.	T	S	T	T	T	T			S							S	S	S	.	.	.	.	.	.	.	.	T	T										T	T	T											T	T								S		S			T	T								S
Template Predicted Secondary structure						.																			.	.	.	.	.	.	.	.
Template SS confidence
		672	.	.	.		.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.									.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
		373		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		D	.	E	Y	A	L	K	E	Y	G	V	M	R	V	R	N	V	K	E	S	A	A	H	D	Y	T	L	R	E	L	K	L	S	K	V	G	Q	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E
Query Conservation			.
Alig confidence			.																																			.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		S	X	E	E	G	T	R	A	F	G	D	V	V	V	K	I	N	Q	H	K	R	C	P	D	Y	I	I	Q	K	L	N	I	V	N	K	K	.	.	.	.	E	K	A	T	G	R	E	V	T	H	I	Q	F	T	S	W	P	D	H	G	V	P	E	D	P	H	L	L	L	K	L	R	R	R	V	N	A	F	S	N
Template Known Secondary structure			T	T	T						T	T												S	S											S	S	.	.	.	.	S														S			T	T	S			S													T	T	S
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.					.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	M	D	A	G	P	V	V	V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K	G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R	S	G	M	V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I	E	T	L	Q	R
Query Conservation
Alig confidence		.	.																																			.	.	.
Template Conservation		.	.																																			.	.	.
Template Sequence		.	.	F	F	S	G	P	I	V	V	H	S	S	A	G	V	G	R	T	G	T	Y	I	G	I	D	A	X	L	E	G	L	E	A	E	N	.	.	.	K	V	D	V	Y	G	Y	V	V	K	L	R	R	Q	R	C	L	X	V	Q	V	E	A	Q	Y	I	L	I	H	Q	A	L	V	E	Y	N	Q	F	G	E	T
Template Known Secondary structure		.	.	T	T									S	S	S	S																				S	.	.	.												T	T	T	S	T	T		S
Template Predicted Secondary structure		.	.																																			.	.	.
Template SS confidence
				819	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.				.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	E	E	Q	K	S	K	R	K	G	H	E	Y	T	N	I	K	Y	S	L	A	D	Q	T	S	G	D	Q	S	P	L	P	P	C	T	P	T	P	P	C	A	E	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	N	L	S	E	L	H	P	Y	L	H	N	X	K	K	R	D	P	P	S	E	P	S	P	L	E	A	E	F	Q	R	L	P	S	Y	R	S	W	R	T	Q	H	I	G	N
Template Known Secondary structure					T	T	T												S	S	T	T	S															T	T		S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		894	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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