Job Description Q06124 Confidence 99.85% Date Wed May 9 17:40:46 BST 2012 Rank 90 Aligned Residues 159 % Identity 31% Template c1x27F_ PDB info PDB header:signaling protein Chain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas Resolution 2.70 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	R	P	S	K	S	N	P	G	D	F	T	L	S	V	R	R	N	G	A	V	T	H	I	K	I	Q	N	T	G	D	Y	Y	D	L	Y	G	G	E	K	F	A	T	L	A	E	L	V	Q	Y	Y	M	E	H	H	G	Q	L	K	E	K	N	G	D	V	I	E	L	K	Y	P	L	N	C	A	D	P	T
Query Conservation
Alig confidence																												.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	A	L	H	S	Y	E	P	S	H	D	G	D	L	G	F	E	K	G	E	Q	L	R	I	L	.	.	E	Q	S	G	E	W	W	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	L	T	T	G	Q	E	G	F	I	P	F	N	F	V	A	K	A	N	S	L	E
Template Known Secondary structure					S	S		B				S	T	T	B			B		T	T							.	.			B	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S								G	G	G					S		S	T
Template Predicted Secondary structure																												.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100																					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																								.																																														.
Query SS confidence																								.																																														.
Query Sequence		S	E	R	W	F	H	G	H	L	S	G	K	E	A	E	K	L	L	T	E	K	G	.	K	H	G	S	F	L	V	R	E	S	Q	S	H	P	G	D	F	V	L	S	V	R	T	G	D	D	K	G	E	S	N	D	G	K	S	K	V	T	H	V	M	I	R	C	Q	.	E	L	K	Y	D	V	G	G	G	E	R
Query Conservation																								.																																														.
Alig confidence																								.																											.	.	.	.	.															.
Template Conservation																																																			.	.	.	.	.
Template Sequence		P	E	P	W	F	F	K	N	L	S	R	K	D	A	E	R	Q	L	L	A	P	G	N	T	H	G	S	F	L	I	R	E	S	E	S	T	A	G	S	F	S	L	S	V	R	D	F	D	Q	.	.	.	.	.	N	Q	G	E	V	V	K	H	Y	K	I	R	N	L	D	N	G	G	F	Y	I	S	P	R	I	T
Template Known Secondary structure		T	S	T	T	B		S	S											T	S	S	S			T	T								S	S	S	T	T											S	.	.	.	.	.	S	S													T	T	S				S	S	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.						.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	S	L	T	D	L	V	E	H	Y	K	K	N	P	M	V	E	T	L	G	T	V	L	Q	L	K	Q	P	L	N	T
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		F	P	G	L	H	E	L	V	R	H	Y	T	N	A	S	D	.	.	.	.	G	L	C	T	R	L	S	R	P	C	Q	T
Template Known Secondary structure		B	S	S													S	.	.	.	.	S	S	S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions