Job Description Q06124 Confidence 99.85% Date Wed May 9 17:40:46 BST 2012 Rank 88 Aligned Residues 157 % Identity 29% Template c1g83A_ PDB info PDB header:transferase Chain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fyn; PDBTitle: crystal structure of fyn sh3-sh2 Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	A	R	P	S	K	S	N	P	G	D	F	T	L	S	V	R	R	N	G	A	V	T	H	I	K	I	Q	N	T	G	D	Y	Y	D	L	Y	G	G	E	K	F	A	T	L	A	E	L	V	Q	Y	Y	M	E	H	H	G	Q	L	K	E	K	N	G	D	V	I	E	L	K	Y	P	L	N	C	A	D	P	T
Query Conservation
Alig confidence																													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	A	L	Y	D	Y	E	A	R	T	E	D	D	L	S	F	H	K	G	E	K	F	Q	I	L	N	.	S	S	E	G	D	W	W	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	L	T	T	G	E	T	G	Y	I	P	S	N	Y	V	A	P	V	D	S	I	Q
Template Known Secondary structure					S	S		B				S	S	S	B			B		T	T								.			S	S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	T								G	G	G				T	T	S	G	G
Template Predicted Secondary structure																													.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.																					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																								.																																														.
Query SS confidence																								.																																														.
Query Sequence		S	E	R	W	F	H	G	H	L	S	G	K	E	A	E	K	L	L	T	E	K	G	.	K	H	G	S	F	L	V	R	E	S	Q	S	H	P	G	D	F	V	L	S	V	R	T	G	D	D	K	G	E	S	N	D	G	K	S	K	V	T	H	V	M	I	R	C	Q	.	E	L	K	Y	D	V	G	G	G	E	R
Query Conservation																								.																																														.
Alig confidence																								.																											.	.	.	.	.															.
Template Conservation																																																			.	.	.	.	.
Template Sequence		A	E	E	W	Y	F	G	K	L	G	R	K	D	A	E	R	Q	L	L	S	F	G	N	P	R	G	T	F	L	I	R	E	S	E	T	T	K	G	A	Y	S	L	S	I	R	D	W	D	D	.	.	.	.	.	M	K	G	D	H	V	K	H	Y	K	I	R	K	L	D	N	G	G	Y	Y	I	T	T	R	A	Q
Template Known Secondary structure		G	S	S	S	B		T	T												S	T	T			T	T								S	S	S	T	T											S	.	.	.	.	.	S	S													T	T	S					T	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	S	L	T	D	L	V	E	H	Y	K	K	N	P	M	V	E	T	L	G	T	V	L	Q	L	K	Q	P
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		F	E	T	L	Q	Q	L	V	Q	H	Y	S	E	R	A	A	.	.	.	.	G	L	S	S	R	L	V	V	P
Template Known Secondary structure			S	S													T	.	.	.	.	T	S	S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.					.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions