Job Description P07948 Confidence 100.00% Date Fri May 25 10:07:35 BST 2012 Rank 39 Aligned Residues 274 % Identity 38% Template c3plsA_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrophage-stimulating protein receptor; PDBTitle: ron in complex with ligand amp-pnp Resolution 2.24 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.			280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.																					.	.	.	.										.	.
Query SS confidence															.	.																					.	.	.	.										.	.
Query Sequence		D	A	W	E	I	P	R	E	S	I	K	L	V	.	.	K	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	N	S	T	.	.	.	.	K	V	A	V	K	T	L	K	P	.	.	G	T	M	S	V	Q	A	F	L	E	E	A	N	L	M	K	T	L	Q	H	D	K	L	V	R	L	Y	A	V	V
Query Conservation															.	.																					.	.	.	.										.	.
Alig confidence															.	.																					.	.	.	.										.	.
Template Conservation
Template Sequence		K	D	V	L	I	P	H	E	R	V	V	T	H	S	D	R	V	I	G	K	G	H	F	G	V	V	Y	H	G	E	Y	I	D	Q	A	Q	N	R	I	Q	C	A	I	K	S	L	S	R	I	T	E	M	Q	Q	V	E	A	F	L	R	E	G	L	L	M	R	G	L	N	H	P	N	V	L	A	L	I	G	I	M
Template Known Secondary structure		G	G	G	B			G	G	G													T	T											S	S	S											T	T			S																T				T	T	B
Template Predicted Secondary structure
Template SS confidence
		1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
		310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		T	.	R	E	E	P	I	Y	I	I	T	E	Y	M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	G	K	V	L	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	Y	I	E	R	K	N	Y	I	H	R	D	L	R	A	A	N	V	L	V	S	E	S	L	M	C	K	I	A	D	F	G	L
Query Conservation			.
Alig confidence			.																							.
Template Conservation																										.
Template Sequence		L	P	P	E	G	L	P	H	V	L	L	P	Y	M	C	H	G	D	L	L	Q	F	I	R	.	S	P	Q	R	N	P	T	V	K	D	L	I	S	F	G	L	Q	V	A	R	G	M	E	Y	L	A	E	Q	K	F	V	H	R	D	L	A	A	R	N	C	M	L	D	E	S	F	T	V	K	V	A	D	F	G	L
Template Known Secondary structure				S	S	S										T	T		B							.		T	T				B																					T	T				S			S	G	G	G					T	T								T	T	S
Template Predicted Secondary structure																										.
Template SS confidence
		1151	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.		.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.
		389	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		A	R	V	I	.	.	.	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	C	F	T	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	V	T	Y	G	K	I	P	Y	P	G	R	T	N	A	D	V	M	T	A	L	S	Q	G	Y	R	M	P	R	V
Query Conservation						.	.	.
Alig confidence						.	.	.
Template Conservation
Template Sequence		A	R	D	I	L	D	R	E	Y	Y	S	V	Q	Q	H	R	H	A	R	L	P	V	K	W	T	A	L	E	S	L	Q	T	Y	R	F	T	T	K	S	D	V	W	S	F	G	V	L	L	W	E	L	L	T	R	G	A	P	P	Y	R	H	I	D	P	F	D	L	T	H	F	L	A	Q	G	R	R	L	P	Q	P
Template Known Secondary structure		S		T	T	T	T	G	G	G	G		S			S	S		T	T		G	G	G	G	S						T	T																						T	S			T	T	T	T	S		G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.		.	.	.	510	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		E	N	C	P	D	E	L	Y	D	I	M	K	M	C	W	K	E	K	A	E	E	R	P	T	F	D	Y	L	Q	S	V	L	D	D	F	Y	T	A	T	E	G	.	Q	Y	Q	Q	Q	P
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		E	Y	C	P	D	S	L	Y	Q	V	M	Q	Q	C	W	E	A	D	P	A	V	R	P	T	F	R	V	L	V	G	E	V	E	Q	I	V	S	A	L	L	G	D	H	Y	V	Q	L	P
Template Known Secondary structure		T	T													T		S	S	G	G	G	S																			S			B
Template Predicted Secondary structure
Template SS confidence
		1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions