Phyre 2 alignment of P07948 with c3mdyC

Job Description P07948
Confidence 100.00% Date Fri May 25 10:07:35 BST 2012

Rank 181 Aligned Residues 279

% Identity 25% Template c3mdyC_

PDB info PDB header:transferase/isomerase Chain: C: PDB Molecule:bone morphogenetic protein receptor type-1b; PDBTitle: crystal structure of the cytoplasmic domain of the bone morphogenetic2 protein receptor type-1b (bmpr1b) in complex with fkbp12 and ldn-3 193189

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	I	S	D	M	I	K	H	Y	Q	K	Q	A	D	G	L	C	R	R	L	E	K	A	C	I	S	P	K	P	Q	K	P	W	D	K	D	A	W	E	I	P	R	E	S	I	K	L	V	K	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	N	S	T	K	V	A	V	K	T	L	K	P	G	T	M
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence	S	L	R	D	L	I	E	Q	S	Q	S	S	G	S	G	S	G	L	P	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	R	T	I	A	K	Q	I	Q	M	V	K	Q	I	G	K	G	R	Y	G	E	V	W	M	G	K	W	.	R	G	E	K	V	A	V	K	V	F	F	T	T	E	E
Template Known Secondary structure														S		S	S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T															T	T									.	T	T										G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
	175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

	283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence	S	V	Q	A	F	L	E	E	A	N	L	M	K	T	L	Q	H	D	K	L	V	R	L	Y	A	V	V	T	R	E	E	.	.	.	.	P	I	Y	I	I	T	E	Y	M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	G	K	V	L	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	Y	I
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.																							.	.	.
Template Conservation																																																										.	.	.
Template Sequence	A	S	W	F	R	E	T	E	I	Y	Q	T	V	L	M	R	H	E	N	I	L	G	F	I	A	A	D	I	K	G	T	G	S	W	T	Q	L	Y	L	I	T	D	Y	H	E	N	G	S	L	Y	D	Y	L	K	S	T	T	.	.	.	L	D	A	K	S	M	L	K	L	A	Y	S	S	V	S	G	L	C	H	L
Template Known Secondary structure											T	S	T	T				T	T	B										S		G	G	G											T	T		B										.	.	.	B
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
	239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.				.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

	359	360	.									.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.							.	420	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Query Sequence	E	R	K	.	.	.	.	.	.	.	.	N	Y	I	H	R	D	L	R	A	A	N	V	L	V	S	E	S	L	M	C	K	I	A	D	F	G	L	A	R	V	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	.	.	.	.	.	.	C	F	T	I	K	S
Query Conservation				.	.	.	.	.	.	.	.																																																										.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																												.	.	.	.											.	.	.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence	H	T	E	I	F	S	T	Q	G	K	P	A	I	A	H	R	D	L	K	S	K	N	I	L	V	K	K	N	G	T	C	C	I	A	D	L	G	L	A	V	K	F	I	I	P	P	N	T	R	V	G	T	K	R	.	.	.	.	Y	M	P	P	E	V	L	D	E	S	L	N	R	N	H	F	Q	S	Y	I	M	A
Template Known Secondary structure		S		B		S	T	T		B						S				G	G	G					T	T	S								T	T										S	S		S		G	G	.	.	.	.	G							T	S				T	T		T
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
	316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.					370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

	425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.																.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.							.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence	D	V	W	S	F	G	I	L	L	Y	E	I	V	T	Y	G	K	I	P	Y	P	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	A	D	V	M	T	A	L	S	Q	G	Y	R	M	P	R	V	E	N	.	.	.	.	.	.	C	P	D	E	L	Y	D	I	M	K	M	C	W	K	E	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence															.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation															.
Template Sequence	D	M	Y	S	F	G	L	I	L	W	E	V	A	R	.	R	C	V	S	G	G	I	V	E	E	Y	Q	L	P	Y	H	D	L	V	P	S	D	P	S	Y	E	D	M	R	E	I	V	C	I	K	K	L	R	P	S	F	P	N	R	W	S	S	D	E	C	L	R	Q	M	G	K	L	M	T	E	C	W	A	H	N
Template Known Secondary structure														T	.	T	B		B	T	T	B							T	T	T	T	T	S		S	S											T	T	S								G	G	G	G	G															S		S	S
Template Predicted Secondary structure															.
Template SS confidence
	399	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.

	484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	E	E	R	P	T	F	D	Y	L	Q	S	V	L	D	D	F	Y	T	A	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence	P	A	S	R	L	T	A	L	R	V	K	K	T	L	A	K	M	S	E	S	Q	D
Template Known Secondary structure	G	G	G	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
	478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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