Job Description P07948 Confidence 100.00% Date Fri May 25 10:07:35 BST 2012 Rank 242 Aligned Residues 244 % Identity 20% Template c3ll6B_ PDB info PDB header:transferase Chain: B: PDB Molecule:cyclin g-associated kinase; PDBTitle: crystal structure of the human cyclin g associated kinase (gak) Resolution 2.10 Å

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		241	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure											.																			.												.																					.																		.
Query SS confidence											.																			.												.																					.																		.
Query Sequence		E	I	P	R	E	S	I	K	L	.	V	K	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	.	N	S	T	K	V	A	V	K	T	L	K	.	P	G	T	M	S	V	Q	A	F	L	E	E	A	N	L	M	K	T	L	Q	.	H	D	K	L	V	R	L	Y	A	V	V	T	R	E	E	P	I	.
Query Conservation											.																			.												.																					.																		.
Alig confidence											.																			.												.																					.																		.
Template Conservation
Template Sequence		T	V	E	L	G	E	L	R	L	R	V	R	R	V	L	A	E	G	F	A	F	V	Y	E	A	Q	D	V	G	S	G	R	E	Y	A	L	K	R	L	L	S	N	E	E	E	K	N	R	A	I	I	Q	E	V	C	F	M	K	K	L	S	G	H	P	N	I	V	Q	F	C	S	A	A	S	I	G	K	E	E	S
Template Known Secondary structure						T	T																						T	T	T												S	S																		T	T	S	T	T	B											G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
									316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																.	.
Query SS confidence		.	.	.	.	.	.	.																																																.	.
Query Sequence		.	.	.	.	.	.	.	Y	I	I	T	E	Y	M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	G	K	V	L	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	Y	I	E	R	K	N	.	.	Y	I	H	R	D	L	R	A	A	N	V	L	V	S	E	S	L	M	C	K	I	A	D	F
Query Conservation		.	.	.	.	.	.	.																																																.	.
Alig confidence		.	.	.	.	.	.	.																																																.	.
Template Conservation
Template Sequence		D	T	G	Q	A	E	F	L	L	L	T	E	L	C	K	G	Q	L	V	E	F	L	K	K	M	E	S	R	G	P	L	S	C	D	T	V	L	K	I	F	Y	Q	T	C	R	A	V	Q	H	M	H	R	Q	K	P	P	I	I	H	R	D	L	K	V	E	N	L	L	L	S	N	Q	G	T	I	K	L	C	D	F
Template Known Secondary structure		T	T	S	S											S											T	T	T		S																						T	S	S	S			B						G	G	G					T	T	S				B
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	R	V	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	C	F	T	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	V	T	Y	G	K	I	P	Y	P	G	R	T	N	A	D	V	M	T	A	L	S	Q	G	Y	R	M	P	R	V	E
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.																																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.																																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	A	T	T	I	S	H	Y	P	.	.	.	.	.	.	.	.	.	.	.	D	T	P	E	I	I	D	Y	S	N	F	P	I	G	E	K	Q	D	I	W	A	L	G	C	I	L	Y	L	L	C	F	.	R	Q	H	P	F	E	S	I	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D
Template Known Secondary structure		T	T		B			T	T			.	.	.	.	.	.	.	.	.	.	.						S		S					S	S																		.	S	S		S						T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.																																.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.												.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.																.	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	C	P	D	E	L	Y	D	I	M	K	M	C	W	K	E	K	A	E	E	R	P	T	F	D	Y	L	Q	S	V	L	D	D	F	Y	T	A	T	E	G	Q	Y	Q	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Q	Y	T	V	F	H	S	L	I	R	A	M	L	Q	V	N	P	E	E	R	L	S	I	A	E	V	V	H	Q	L	Q	E	I	A	A	A	R	N	V	N	P	K	S	P
Template Known Secondary structure			S	S											S		S	S	G	G	G	S																		T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions