Job Description P07948 Confidence 100.00% Date Fri May 25 10:07:35 BST 2012 Rank 259 Aligned Residues 223 % Identity 24% Template c3kn5B_ PDB info PDB header:transferase Chain: B: PDB Molecule:ribosomal protein s6 kinase alpha-5; PDBTitle: crystal structure of the c-terminal kinase domain of msk1 in complex2 with amp-pnp Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		244	.	.	.	.	.	250				.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																		.																																.
Query SS confidence									.	.	.																		.																																.
Query Sequence		R	E	S	I	K	L	V	.	.	.	K	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	.	N	S	T	K	V	A	V	K	T	L	K	P	G	T	M	S	V	Q	A	F	L	E	E	A	N	L	M	K	T	L	Q	.	H	D	K	L	V	R	L	Y	A	V	V	T	R	E	E	P	I	Y	I	I
Query Conservation									.	.	.																		.																																.
Alig confidence									.	.	.																		.															.	.																.
Template Conservation																																												.	.
Template Sequence		Y	Q	H	Y	D	L	D	L	K	D	K	P	L	G	E	G	S	F	S	I	C	R	K	C	V	H	K	K	S	N	Q	A	F	A	V	K	I	I	S	K	R	M	.	.	E	A	N	T	Q	K	E	I	T	A	L	K	L	C	E	G	H	P	N	I	V	K	L	H	E	V	F	H	D	Q	L	H	T	F	L	V
Template Known Secondary structure									S	S	S			S	B			T	T									T	T	T	T										G	G	G	.	.														T	T	T		T	T	B										S	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.			.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	Y	M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	G	K	V	L	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	Y	I	E	R	K	N	Y	I	H	R	D	L	R	A	A	N	V	L	V	S	E	S	L	M	C	K	I	A	D	F	G	L	A	R	V	I	E	D	N	E	Y	T
Query Conservation
Alig confidence																		.	.																																								.																		.	.	.	.	.
Template Conservation																		.	.																																								.																		.	.	.	.	.
Template Sequence		M	E	L	L	N	G	G	E	L	F	E	R	I	K	K	K	.	.	K	H	F	S	E	T	E	A	S	Y	I	M	R	K	L	V	S	A	V	S	H	M	H	D	V	G	V	V	H	R	D	L	K	P	E	N	L	L	F	.	T	D	L	E	I	K	I	I	D	F	G	F	A	R	L	K	P	.	.	.	.	.
Template Known Secondary structure							S		B							T		.	.	S			B																					T	T								G	G	G				.											T	T						.	.	.	.	.
Template Predicted Secondary structure																		.	.																																								.																		.	.	.	.	.
Template SS confidence
		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.			.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.		.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.								.	450	.	.	.	.	.	.	.	.	.				460	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.												.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.												.	.	.
Query Sequence		A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	C	F	T	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	V	T	Y	G	K	I	P	Y	P	G	R	T	.	.	.	.	.	.	.	N	A	D	V	M	T	A	L	S	Q	G	.	.	.	Y	R	M	P	R	V	E	N	C
Query Conservation																																																				.	.	.	.	.	.	.												.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.										.	.	.	.	.	.	.												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	G	Y	D	E	S	C	D	L	W	S	L	G	V	I	L	Y	T	M	L	S	.	G	Q	V	P	F	Q	S	H	D	R	S	L	T	C	T	S	A	V	E	I	M	K	K	I	K	K	G	D	F	S	F	E	G	E	A	W	K	N	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T																	.	S			T	T			S	S		S	S															T						S	T	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template SS confidence
																				574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.		.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	E	L	Y	D	I	M	K	M	C	W	K	E	K	A	E	E	R	P	T	F	D	Y	L	Q	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	E	A	K	D	L	I	Q	G	L	L	T	V	D	P	N	K	R	L	K	M	S	G	L	R	Y
Template Known Secondary structure																S	S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		657	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions