Job Description P07948 Confidence 100.00% Date Fri May 25 10:07:35 BST 2012 Rank 114 Aligned Residues 252 % Identity 38% Template c3brbB_ PDB info PDB header:transferase Chain: B: PDB Molecule:proto-oncogene tyrosine-protein kinase mer; PDBTitle: crystal structure of catalytic domain of the proto-oncogene tyrosine-2 protein kinase mer in complex with adp Resolution 1.90 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.					.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.																			.	.	.
Query SS confidence																																			.	.	.	.																			.	.	.
Query Sequence		D	K	D	A	W	E	I	P	R	E	S	I	K	L	V	K	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	N	.	.	.	.	S	T	K	V	A	V	K	T	L	K	P	G	T	M	S	V	Q	A	.	.	.	F	L	E	E	A	N	L	M	K	T	L	Q	H	D	K	L	V	R	L	Y	A	V
Query Conservation																																			.	.	.	.																			.	.	.
Alig confidence																																			.	.	.	.																			.	.	.
Template Conservation
Template Sequence		K	L	E	D	V	V	I	D	R	N	L	L	I	L	G	K	I	L	G	E	G	E	F	G	S	V	M	E	G	N	L	K	Q	E	D	G	T	S	L	K	V	A	V	K	T	M	K	L	D	N	S	S	Q	R	E	I	E	E	F	L	S	E	A	A	C	M	K	D	F	S	H	P	N	V	I	R	L	L	G	V
Template Known Secondary structure			T	T	T	T	B			G	G	G											S	S											T	T	S													S																						B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
							309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.					.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																															.	.	.	.
Query SS confidence		.	.	.	.	.																															.	.	.	.
Query Sequence		.	.	.	.	.	V	T	R	E	E	P	I	Y	I	I	T	E	Y	M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	G	K	.	.	.	.	V	L	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	Y	I	E	R	K	N	Y	I	H	R	D	L	R	A	A	N	V	L	V	S	E	S	L
Query Conservation		.	.	.	.	.																															.	.	.	.
Alig confidence		.	.	.	.	.																															.	.	.	.
Template Conservation
Template Sequence		C	I	E	M	S	S	Q	G	I	P	K	P	M	V	I	L	P	F	M	K	Y	G	D	L	H	T	Y	L	L	Y	S	R	L	E	T	G	P	K	H	I	P	L	Q	T	L	L	K	F	M	V	D	I	A	L	G	M	E	Y	L	S	N	R	N	F	L	H	R	D	L	A	A	R	N	C	M	L	R	D	D	M
Template Known Secondary structure							S	S	S												T	T		B								T	T	S	T	T	S																										T	T							S	G	G	G					T	T	S
Template Predicted Secondary structure
Template SS confidence
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	K	I	A	D	F	G	L	A	R	V	I	E	D	N	E	Y	T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	C	F	T	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	V	T	Y	G	K	I	P	Y	P	G	R	T	N	A	D	V	M	T	A	L	S	Q	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	C	V	A	D	F	G	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	W	I	A	I	E	S	L	A	D	R	V	Y	T	S	K	S	D	V	W	A	F	G	V	T	M	W	E	I	A	T	R	G	M	T	P	Y	P	G	V	Q	N	H	E	M	Y	D	Y	L	L	H	G
Template Known Secondary structure							S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S																												T	T	S			S	S	T	T			G	G	G							T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		736	.	.	.	740	.	.	.	.	.																		.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	M	P	R	V	E	N	C	P	D	E	L	Y	D	I	M	K	M	C	W	K	E	K	A	E	E	R	P	T	F	D	Y	L	Q	S	V	L	D	D	F	Y	T	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	L	K	Q	P	E	D	C	L	D	E	L	Y	E	I	M	Y	S	C	W	R	T	D	P	L	D	R	P	T	F	S	V	L	R	L	Q	L	E	K	L	L	E	S	L
Template Known Secondary structure								T	T												T	T		S	S	G	G	G	S																	S
Template Predicted Secondary structure
Template SS confidence
		817	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions