Job Description P07948 Confidence 100.00% Date Fri May 25 10:07:35 BST 2012 Rank 172 Aligned Residues 262 % Identity 20% Template c2qr8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2) Resolution 2.00 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure																										.																														.
Query SS confidence																										.																														.
Query Sequence		R	E	S	I	K	L	V	K	R	L	G	A	G	Q	F	G	E	V	W	M	G	Y	Y	N	.	N	S	T	K	V	A	V	K	T	L	K	P	G	T	M	S	V	Q	A	F	L	E	E	A	N	L	M	K	T	.	L	Q	H	D	K	L	V	R	L	Y	A	V	V	T	R	E	E	P	I	Y	I	I	T	E	Y
Query Conservation																										.																														.
Alig confidence																										.														.	.	.														.
Template Conservation																																								.	.	.
Template Sequence		T	D	G	Y	E	V	K	E	D	I	G	V	G	S	Y	S	V	C	K	R	C	I	H	K	A	T	N	M	E	F	A	V	K	I	I	D	K	S	.	.	.	K	R	D	P	T	E	E	I	E	I	L	L	R	Y	G	Q	H	P	N	I	I	T	L	K	D	V	Y	D	D	G	K	Y	V	Y	V	V	T	E	L
Template Known Secondary structure		T	T	T											S	S									T	T	T	T										T	T	.	.	.	T			T											T	T	S	T	T	B										S	S
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.				.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		M	A	K	G	S	L	L	D	F	L	K	S	D	E	G	G	K	V	L	L	P	K	L	I	D	F	S	A	Q	I	A	E	G	M	A	Y	I	E	R	K	N	Y	I	H	R	D	L	R	A	A	N	V	L	V	S	E	S	L	.	.	.	.	M	C	K	I	A	D	F	G	L	A	R	V	I	E	D	N	E	Y
Query Conservation																																																												.	.	.	.
Alig confidence													.	.																																														.	.	.	.
Template Conservation													.	.
Template Sequence		M	K	G	G	E	L	L	D	K	I	L	.	.	R	Q	K	F	F	S	E	R	E	A	S	A	V	L	F	T	I	T	K	T	V	E	Y	L	H	A	Q	G	V	V	H	R	D	L	K	P	S	N	I	L	Y	V	D	E	S	G	N	P	E	S	I	R	I	C	D	F	G	F	A	K	Q	L	R	A	E	N	G
Template Known Secondary structure				S		B							.	.	T		T	T																							T	T				S				G	G	G				S	S	S	S			G	G	G							T	T					B		T	T	S
Template Predicted Secondary structure													.	.
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.			.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.				450	.	.	.	.	.	.	.	.	.	460	.	.	.	.				.	.	.	.	.	470	.
Predicted Secondary structure																																																						.	.	.																.	.	.
Query SS confidence																																																						.	.	.																.	.	.
Query Sequence		T	A	R	E	G	A	K	F	P	I	K	W	T	A	P	E	A	I	N	F	G	C	F	T	I	K	S	D	V	W	S	F	G	I	L	L	Y	E	I	V	T	Y	G	K	I	P	Y	P	G	R	T	N	.	.	.	A	D	V	M	T	A	L	S	Q	G	Y	R	M	P	R	.	.	.	V	E	N	C	P	D	E
Query Conservation																																																						.	.	.																.	.	.
Alig confidence											.																																.											.	.	.																.	.	.
Template Conservation											.																																.
Template Sequence		L	L	M	T	P	C	Y	T	A	.	N	F	V	A	P	E	V	L	E	R	Q	G	Y	D	A	A	C	D	I	W	S	L	G	V	L	L	Y	T	M	L	T	.	G	Y	T	P	F	A	N	G	P	D	D	T	P	E	E	I	L	A	R	I	G	S	G	K	F	S	L	S	G	G	Y	W	N	S	V	S	D	T
Template Known Secondary structure			B			S	S				.	S																															.	S	S		S	S		S	S	T	T	S												T					S	S					T	S
Template Predicted Secondary structure											.																																.
Template SS confidence
		574	.	.	.	.	.	580	.	.		.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.		.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		L	Y	D	I	M	K	M	C	W	K	E	K	A	E	E	R	P	T	F	D	Y	L	Q	S	.	.	V	L	D	D	F	Y	T	A	T	E	G	Q	Y	Q	Q	Q	P
Query Conservation																										.	.
Alig confidence																										.	.
Template Conservation
Template Sequence		A	K	D	L	V	S	K	M	L	H	V	D	P	H	Q	R	L	T	A	A	L	V	L	R	H	P	W	I	V	H	W	D	Q	L	P	Q	Y	Q	L	N	R	Q	D
Template Known Secondary structure										S		S	S	T	T	T	S								T	S					T	G	G	G	S			S
Template Predicted Secondary structure
Template SS confidence
		652	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions