Job Description P07948 Confidence 99.78% Date Fri May 25 10:07:35 BST 2012 Rank 356 Aligned Residues 114 % Identity 17% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	S	L	S	D	D	G	V	D	L	K	T	Q	P	V	R	N	T	E	R	T	I	Y	V	R	D	P	T	S	N	K	Q	Q	R	P	V	P	E	S	Q	L	L	P	G	Q	R	F	Q	T	K	D	P	E	E	Q	G	D	I	V	V	A	L	Y	P	Y	D	G	I	H	P	D	D	L	S	F	K	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D
Template Known Secondary structure			S	S																																															S	S			T	T								S	S		B				S	T	T				B		S	S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		89	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.									.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		K	M	K	V	L	.	.	.	.	.	.	E	E	H	G	E	W	W	K	A	K	S	.	.	.	.	.	.	.	.	L	L	T	K	K	E	G	F	I	P	S	N	Y	V	A	K	L	N
Query Conservation							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V	P
Template Known Secondary structure									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions