Job Description A0PJM3 Confidence 99.21% Date Tue Apr 3 14:51:25 BST 2012 Rank 17 Aligned Residues 155 % Identity 15% Template d2qxfa1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.50

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		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430			.	.	.	.	.	.	.	.				.	440	.	.	.	.			.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.									.	.									.	.	.							.	.
Query SS confidence																		.									.	.									.	.	.							.	.
Query Sequence		P	G	I	Y	A	L	D	C	E	M	C	Y	T	T	H	G	.	L	E	L	T	R	V	T	V	.	.	V	D	A	D	M	R	V	V	.	.	.	Y	D	T	F	V	K	.	.	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V	Q	A	I	L
Query Conservation																		.									.	.									.	.	.							.	.
Alig confidence																		.									.	.									.	.	.							.	.
Template Conservation
Template Sequence		S	T	F	L	F	H	D	Y	E	T	F	G	T	H	P	A	L	D	R	P	A	Q	F	A	A	I	R	T	D	S	E	F	N	V	I	G	E	P	E	V	F	Y	C	K	P	A	D	D	Y	L	P	Q	P	G	A	V	L	I	T	G	I	T	P	Q	E	A	R	A	K	G	E	N	E	A	A	F	A	A	R	I
Template Known Secondary structure												S	S	S		T	T	T	S												T	T	S		B		S							B				T	T																							B
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		479	480	.	.	.	.		.	.	.	.	.	490	.	.		.	.	.	.	.	.	.	500						.	.	.	.	.	.	.														.	.	510	.											.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure								.									.									.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.
Query SS confidence								.									.									.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	F	F	S	A	.	Q	T	I	L	I	G	H	S	.	L	E	S	D	L	L	A	L	.	.	.	.	.	K	L	I	H	S	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	T	A	.	.	.	.	.	.	.	.	.	.	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N
Query Conservation								.									.									.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.
Alig confidence								.									.									.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	S	L	F	T	V	P	K	T	C	I	L	G	Y	N	N	V	R	F	D	D	E	V	T	R	N	I	F	Y	R	N	F	Y	D	P	Y	A	W	S	W	Q	H	D	N	S	R	W	D	L	L	D	V	M	R	A	C	Y	A	L	R	P	E	G	I	N	W	P	E	N	D	D	G	L	P	S	F	R	L	E	H
Template Known Secondary structure						T	S	T	T						S	S	T	T	T	T												T	T	S		S	S	G	G	G	T	G	G	G																			T	T	S				B		T	T	S	S	B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	D	Y	L	A	Q	I	I	Q	D	S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q	R	A	Q	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.
Template Sequence		L	T	K	A	N	.	.	.	.	.	.	.	G	I	E	H	S	D	A	M	A	D	V	Y	A	T	I	A	M	A	K	L	V	K	T	R	Q	P	R	L
Template Known Secondary structure						T	.	.	.	.	.	.	.	T						T	T																	S
Template Predicted Secondary structure							.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions