Job Description A0PJM3 Confidence 99.62% Date Tue Apr 3 14:51:25 BST 2012 Rank 3 Aligned Residues 147 % Identity 19% Template d2igia1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.70

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		408	.	410	.	.	.	.	.	.	.	.		.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.						.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.								.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure													.																			.	.	.	.	.																			.	.	.	.	.	.	.
Query SS confidence													.																			.	.	.	.	.																			.	.	.	.	.	.	.
Query Sequence		G	I	Y	A	L	D	C	E	M	C	Y	.	T	T	H	G	L	E	L	T	R	V	T	V	V	D	A	D	M	R	.	.	.	.	.	V	V	Y	D	T	F	V	K	P	D	N	E	I	V	D	Y	N	T	.	.	.	.	.	.	.	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V
Query Conservation													.																			.	.	.	.	.																			.	.	.	.	.	.	.
Alig confidence													.																			.	.	.	.	.																			.	.	.	.	.	.	.													.
Template Conservation																																																																										.
Template Sequence		N	L	I	W	I	D	L	E	M	T	G	L	D	P	E	R	D	R	I	I	E	I	A	T	L	V	T	D	A	N	L	N	I	L	A	E	G	P	T	I	A	V	H	Q	S	D	E	Q	L	A	L	M	D	D	W	N	V	R	T	H	T	A	S	G	L	V	E	R	V	K	A	S	.	T	M	G	D	R	E	A
Template Known Secondary structure											S	S	S		T	T	T													T	T																				T	T												T	T									.
Template Predicted Secondary structure																																																																										.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.
		475	.	.	.	.	480	.	.	.	.						.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.									.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.																				.	.	.	.	.	.	.	.																																					.	.
Query SS confidence												.	.	.	.	.																				.	.	.	.	.	.	.	.																																					.	.
Query Sequence		Q	A	I	L	L	S	F	F	S	A	.	.	.	.	.	Q	T	I	L	I	G	H	S	L	E	S	D	L	L	A	L	K	L	I	.	.	.	.	.	.	.	.	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A	D	Y	L	A	Q	I	I	Q	.	.
Query Conservation												.	.	.	.	.																				.	.	.	.	.	.	.	.																																					.	.
Alig confidence												.	.	.	.	.																				.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	A	T	L	E	F	L	K	Q	W	V	P	A	G	K	S	P	I	C	G	N	S	I	G	Q	D	R	R	F	L	F	K	Y	M	P	E	L	E	A	Y	F	H	Y	R	Y	L	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	L	K	E	L	A	R	R	W	K	P	E	I	L	D	G	F
Template Known Secondary structure										T	T	T	S		T	T	T	S					S	S																			S		S					T	.	.	.	.	.	.	.	.	.	.	.	.	.												G	G	G	G	G	G	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.														.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q	R	A	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	Q	G	T	H	Q	A	M	D	D	I	R	E	S	V	A	E	L	A	Y	Y	R	E	H	F	I	K	L
Template Known Secondary structure																											T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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