Job Description A0PJM3 Confidence 96.82% Date Tue Apr 3 14:51:25 BST 2012 Rank 35 Aligned Residues 128 % Identity 16% Template d2hhva1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.55

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		410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Y	A	L	D	C	E	M	C	Y	T	T	H	G	.	L	E	L	T	R	V	T	V	V	D	A	D	M	R	V	V	Y	D	T	F	V	K	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V	Q	A	I	L	L	S	F	F	S	A	Q	T	I	L
Query Conservation															.
Alig confidence															.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	L	V	V	E	V	V	E	E	N	Y	H	D	A	P	I	V	G	I	A	V	V	N	E	H	G	R	F	F	L	R	P	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	D	P	Q	F	V	A	W	L	G	D	E	T	K	K	K
Template Known Secondary structure										S	S	S		T	T											T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											T	T	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																												.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.					.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.																	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	H	S	L	E	S	D	L	L	A	L	K	.	.	.	.	L	I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A	D	Y	L	A	Q	I	I	Q	D	S	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	N	S	S
Query Conservation															.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	F	D	S	K	R	A	A	V	A	L	K	W	K	G	I	E	L	C	G	V	S	F	D	L	L	L	A	A	Y	L	L	D	P	A	Q	G	V	D	D	V	A	A	A	A	K	M	K	Q	Y	E	A	V	R	P	D	E	A	V	Y	G	K	G	A	K	R	A	V	P	D	E	P	V	L	A	E	H	L	V
Template Known Secondary structure				S	S										T	T	T																			G	G	G				S							T	T	T			S	S									S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
		549	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	A	A	A	I	W	E	L	E	R	P	F	L	D	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions