Job Description A0PJM3 Confidence 99.28% Date Tue Apr 3 14:51:25 BST 2012 Rank 13 Aligned Residues 151 % Identity 19% Template d2f96a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.09

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		409	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.					.	.	.	.	.	.	.					.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure														.												.	.	.	.								.	.	.	.									.	.
Query SS confidence														.												.	.	.	.								.	.	.	.									.	.
Query Sequence		I	Y	A	L	D	C	E	M	C	Y	T	T	.	H	G	L	E	L	T	R	V	T	V	V	.	.	.	.	D	A	D	M	R	V	V	.	.	.	.	Y	D	T	F	V	K	P	D	.	.	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V	Q	A	I
Query Conservation														.												.	.	.	.								.	.	.	.									.	.
Alig confidence														.												.	.	.	.								.	.	.	.									.	.
Template Conservation
Template Sequence		P	V	V	V	D	V	E	T	G	G	F	N	S	A	T	D	A	L	L	E	I	A	A	T	T	V	G	X	D	E	K	G	F	L	F	P	E	H	T	Y	F	F	R	I	E	P	F	E	G	A	N	I	E	P	A	A	L	E	F	T	G	I	K	L	D	H	P	L	R	X	A	V	Q	E	E	A	A	L	T	E
Template Known Secondary structure										S	S	S		T	T	T	B														T	T	S												B				T	T		B										T			T	T		T	T				B
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		478	.	480	.	.									.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.													.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	S	F	F	.	.	.	.	.	.	.	.	S	A	Q	T	I	L	I	G	H	S	L	E	S	D	L	L	A	L	K	.	.	.	.	.	.	.	.	.	.	.	.	L	I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A	D	Y	L	A	Q	I
Query Conservation							.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.											.
Template Conservation																																																																.	.	.											.
Template Sequence		I	F	R	G	I	R	K	A	L	K	A	N	G	C	K	R	A	I	L	V	G	H	N	S	S	F	D	L	G	F	L	N	A	A	V	A	R	T	G	I	K	R	N	P	F	H	P	F	S	S	F	D	T	A	T	L	A	G	L	A	Y	G	.	.	.	Q	T	V	L	A	K	A	C	Q	A	.	A	G	X	E
Template Known Secondary structure													T	T		S							T	T																T																							S	.	.	.			S								.	T	T
Template Predicted Secondary structure																																																																.	.	.											.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.		.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	D	S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		F	D	N	R	E	.	A	H	S	A	R	Y	D	T	E	K	T	A	E	L	F	C	G	I	V	N	R
Template Known Secondary structure				T	T	S	.
Template Predicted Secondary structure							.
Template SS confidence
		187	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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