Job Description A0PJM3 Confidence 22.89% Date Tue Apr 3 14:51:25 BST 2012 Rank 98 Aligned Residues 80 % Identity 15% Template d2b4jc1 SCOP info N-cbl like HIV integrase-binding domain HIV integrase-binding domain Resolution 2.02

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	V	L	R	R	G	Y	L	Q	L	F	T	E	E	C	L	K	F	C	A	S	K	Q	E	A	E	E	K	A	L	N	E	E	K	V	A	Y	D	C	S	P	N	K	N	R	Y	L	N	V	V	L	N	T	L	K	R	L	K	G	L	T	P	S	S	M	P	G	L	S	R	A	A	L	Y	S	R	L	Q	E
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		S	M	D	S	R	L	Q	R	I	H	A	E	I	K	N	S	L	K	I	D	N	L	D	V	N	R	C	I	E	A	L	D	E	L	A	S	L	Q	V	T	M	Q	Q	.	A	Q	K	H	T	E	M	I	T	T	L	K	K	I	R	R	F	K	V	S	Q	V	I	M	E	K	S	T	M	L	Y	N	K	F	K	N
Template Known Secondary structure																		T		T	T	S															T								.			T	T											T	T		T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		281
Predicted Secondary structure
Query SS confidence
Query Sequence		F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		426

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions