Job Description A0PJM3 Confidence 99.39% Date Tue Apr 3 14:51:25 BST 2012 Rank 12 Aligned Residues 157 % Identity 15% Template d1y97a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.50

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		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.																	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	R	D	A	Y	P	G	I	Y	A	L	D	C	E	M	C	Y	T	T	.	H	G	L	E	L	T	R	V	T	V	V	D	A	D	M	R	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	T	F	V	K	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D
Query Conservation																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	E	A	P	R	A	E	T	F	V	F	L	D	L	E	A	T	G	L	P	S	V	E	P	E	I	A	E	L	S	L	F	A	V	H	R	S	S	L	E	N	P	E	H	G	A	L	V	L	P	R	V	L	D	K	L	T	L	C	X	C	P	E	R	P	F	T	A	K	A	S	E	I	T	G	L	S	S	E	G
Template Known Secondary structure			S	S				S										S	S		G	G	G																		T	S		B					B			S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		464	.	.	.	.	.	470						.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.		.	.	.	.	.	.	.	500	.											.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	K	T	S	I	T	.	.	.	.	.	L	P	Q	V	Q	A	I	L	L	S	F	F	S	A	Q	T	I	L	I	G	H	S	.	L	E	S	D	L	L	A	L	K	.	.	.	.	.	.	.	.	.	.	L	I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R
Query Conservation									.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																							.										.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																																										.
Template Sequence		L	A	R	C	R	K	A	G	F	D	G	A	V	V	R	T	L	Q	A	F	L	S	R	Q	A	G	P	I	C	L	V	A	H	N	G	F	D	Y	D	F	P	L	L	C	A	E	L	R	R	L	G	A	R	L	P	R	D	T	V	C	L	D	T	L	P	A	L	R	G	L	D	R	.	A	H	G	Y	S	L	G
Template Known Secondary structure					T	T				S													T	T	S		S	S						T	T	T	T	T	T													T					T	T																.					S
Template Predicted Secondary structure																																																																										.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	A	A	D	Y	L	A	Q	I	I	Q	D	S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		S	L	F	H	R	Y	F	R	.	.	.	.	.	.	A	E	P	S	S	A	E	G	D	V	H	T	L	L	L	I	F	L	H	R	A	A	E
Template Known Secondary structure									S	.	.	.	.	.	.	S																			T
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions