Job Description A0PJM3 Confidence 99.47% Date Tue Apr 3 14:51:25 BST 2012 Rank 9 Aligned Residues 162 % Identity 15% Template d1w0ha_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 1.59

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		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.									.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.			.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																	.	.										.	.
Query SS confidence																	.	.	.	.	.	.	.	.																	.	.										.	.
Query Sequence		G	I	Y	A	L	D	C	E	M	C	Y	T	T	H	G	.	.	.	.	.	.	.	.	L	E	L	T	R	V	T	V	V	D	A	D	M	R	V	V	.	.	Y	D	T	F	V	K	P	D	N	.	.	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V	Q
Query Conservation																	.	.	.	.	.	.	.	.																	.	.										.	.
Alig confidence																	.	.	.	.	.	.	.	.																	.	.										.	.																				.
Template Conservation																																																																									.
Template Sequence		Y	I	C	I	I	D	F	E	A	T	C	E	E	G	N	P	P	E	F	V	H	E	I	I	E	F	P	V	V	L	L	N	T	H	T	L	E	I	E	D	T	F	Q	Q	Y	V	R	P	E	I	N	T	Q	L	S	D	F	C	I	S	L	T	G	I	T	Q	D	Q	V	D	R	.	A	D	T	F	P	Q	V	L
Template Known Secondary structure														T	T			T	T	S														T	T	T		S									B			S	S	S		S																		T	.	S	B
Template Predicted Secondary structure																																																																									.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.
		476	.	.	.	480	.	.	.	.	.	.								.	.	.	490	.	.	.	.	.	.	.	.	.	500	.												.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence													.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		A	I	L	L	S	F	F	S	A	Q	T	.	.	.	.	.	.	.	I	L	I	G	H	S	L	E	S	D	L	L	A	L	K	.	.	.	.	.	.	.	.	.	.	.	L	I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	.	S	L	R	N	L	A	A	D	Y	L	A	Q
Query Conservation													.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence													.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.																								.								.
Template Conservation																																																																													.
Template Sequence		K	K	V	I	D	W	X	K	L	K	E	L	G	T	K	Y	K	Y	S	L	L	T	D	G	S	W	D	X	S	K	F	L	N	I	Q	C	Q	L	S	R	L	K	Y	P	P	F	A	K	K	W	I	N	I	R	K	S	Y	G	N	F	Y	K	V	P	R	S	Q	T	K	L	T	I	X	L	E	.	K	L	G	X
Template Known Secondary structure											T	T	B	T	T	T	B							S	S	T	T	T	T												T					G	G	G	S														T			G	G	G		S							.		T	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	Q	D	S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q	R	A	Q	I	Q	P	R	H	R
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		D	Y	D	G	R	P	.	.	H	C	G	L	D	D	S	K	N	I	A	R	I	A	V	R	X	L	Q	D	G	C	E	L	R	I	N	E	K
Template Known Secondary structure					S		T	.	.	T																			T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		287	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions