Job Description A0PJM3 Confidence 94.03% Date Tue Apr 3 14:51:25 BST 2012 Rank 43 Aligned Residues 140 % Identity 20% Template d1q8ia1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.00

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		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		G	I	Y	A	L	D	C	E	M	C	Y	T	T	H	G	L	E	L	T	R	V	T	V	V	D	A	.	D	M	R	V	V	Y	D	T	F	V	K	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V	Q	A	I	L	L	S	F	F	S	A	Q	T
Query Conservation																												.
Alig confidence										.	.	.																.																								.	.	.	.	.	.	.				.																			.
Template Conservation										.	.	.																																								.	.	.	.	.	.	.				.																			.
Template Sequence		K	W	V	S	I	D	I	E	.	.	.	T	T	R	H	G	E	L	Y	C	I	G	L	E	G	C	G	Q	R	I	V	Y	M	L	G	P	E	N	G	D	A	S	S	L	D	F	E	L	E	Y	.	.	.	.	.	.	.	V	A	S	.	R	P	Q	L	L	E	K	L	N	A	W	F	A	N	Y	D	P	D	.
Template Known Secondary structure										.	.	.			T	T	S										T	T								S	S			S			T	T		S	S					.	.	.	.	.	.	.		S	S	.																		S	.
Template Predicted Secondary structure										.	.	.																																								.	.	.	.	.	.	.				.																			.
Template SS confidence
		151	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.								.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		487	.	.	490	.	.									.	.	.	.	.	.	.	500	.	.																											.	.	.	.		.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure								.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence								.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		I	L	I	G	H	S	.	.	.	.	.	.	.	.	L	E	S	D	L	L	A	L	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	S	T	.	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A
Query Conservation								.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence								.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		V	I	I	G	W	N	V	V	Q	F	D	L	R	M	L	Q	K	H	A	E	R	Y	R	L	P	L	R	L	G	R	D	N	S	E	L	E	W	R	E	H	G	F	K	N	G	V	F	F	A	Q	A	K	G	R	L	I	I	D	G	I	E	A	L	K	S	A	F	W	N	F	S	S	F	S	L	E	T	V	A	Q
Template Known Secondary structure						S	S	T	T	T	T												T	T						S	S	S	S										S	S	S							B	T	T	B												S					S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.							.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		D	Y	L	A	Q	I	I	Q	D	S	Q	D	.	.	.	.	.	.	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	L	M	D	E	I	D	R	R	F	A	E	D	K	P	A	L	A	T	Y	N	L	K	D	C	E	L	V	T	Q	I	F	H
Template Known Secondary structure		T	T			T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions