Job Description A0PJM3 Confidence 86.33% Date Tue Apr 3 14:51:25 BST 2012 Rank 53 Aligned Residues 151 % Identity 14% Template d1noya_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.20

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		408	.	410	.	.	.	.	.	.	.	.	.	420							.	.	.	.	.	.	.	.	.	430	.	.	.	.	.			.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.																.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	Y	A	L	D	C	E	M	C	Y	T	T	.	.	.	.	.	.	H	G	L	E	L	T	R	V	T	V	V	D	A	D	M	.	.	R	V	V	Y	D	T	F	V	K	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.																.	.																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	A	N	C	D	I	E	V	T	G	D	K	F	P	D	P	M	K	A	E	Y	E	I	D	A	I	T	H	Y	D	S	I	D	D	R	F	Y	V	F	D	L	L	N	S	M	Y	G	S	V	S	K	W	D	A	K	L	A	A	K	L	D	C	E	G	G	D	E	V	P	Q	E	I	L	D	R	V	I	Y	M
Template Known Secondary structure													S	S				T	T	T			S										T	T	T	T											S	S													S		G	G	G	T										T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
				469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.	.	.		.	.	.	.	500																																						.	.	.	.	.	.
Predicted Secondary structure		.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	I	T	L	P	Q	V	Q	A	I	L	L	S	F	F	S	A	Q	.	.	T	I	L	I	G	H	S	L	E	S	.	D	L	L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	I	H	S	T
Query Conservation		.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	D	N	E	R	D	M	L	M	E	Y	I	N	L	W	E	Q	K	R	P	A	I	F	T	G	W	N	I	E	G	F	D	V	P	Y	I	M	N	R	V	K	M	I	L	G	E	R	S	M	K	R	F	S	P	I	G	R	V	K	S	K	L	L	Q	N	M	Y	G	S	K	E	I	Y	S	I	D	G	V	S
Template Known Secondary structure				S																S			S					S	S	T	T	T	T																			G	G	G	S	T	T	S									G	G	G		S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		507	.	.	510	.	.	.	.	.			.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.														.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	D	T	A	V	L	F	P	.	.	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A	D	Y	L	A	Q	I	I	Q	D	S	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M
Query Conservation											.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.							.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		I	L	D	Y	L	D	L	Y	K	K	F	A	F	T	N	L	P	.	S	F	S	L	E	S	V	A	Q	H	E	T	K	K	G	K	L	P	Y	D	G	P	I	N	K	L	R	E	T	N	H	Q	R	Y	I	S	Y	N	I	I	D	V	E	S	V	Q	A	I	D	K
Template Known Secondary structure													T					S	.			S										S							S	S		G	G	G
Template Predicted Secondary structure																			.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions