Job Description A0PJM3 Confidence 99.62% Date Tue Apr 3 14:51:25 BST 2012 Rank 4 Aligned Residues 158 % Identity 16% Template d1j9aa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.50

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		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.			.	.	.	.	.	.	.				.	440	.	.	.	.	.	.								.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																									.										.	.								.	.	.									.	.	.	.	.	.	.
Query SS confidence																									.										.	.								.	.	.									.	.	.	.	.	.	.
Query Sequence		E	L	S	R	D	A	Y	P	G	I	Y	A	L	D	C	E	M	C	Y	T	T	H	G	.	L	E	L	T	R	V	T	V	V	.	.	D	A	D	M	R	V	V	.	.	.	Y	D	T	F	V	K	P	D	.	.	.	.	.	.	.	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K
Query Conservation																									.										.	.								.	.	.									.	.	.	.	.	.	.
Alig confidence																									.										.	.								.	.	.									.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	X	S	F	D	K	Q	N	L	I	W	I	D	L	E	X	T	G	L	D	P	E	K	E	R	I	I	E	I	A	T	I	V	T	D	K	N	L	N	I	L	A	E	G	P	V	L	A	V	H	Q	S	D	E	L	L	N	K	X	N	D	W	C	Q	K	T	H	S	E	N	G	L	I	E	R	I	K	A	S
Template Known Secondary structure				T	T			T	T										S	S	S		T	T	T													T	T	S									B		B									S	S												T						T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.						.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500									.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																				.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		T	S	I	T	L	P	Q	V	Q	A	I	L	L	S	F	F	S	A	.	.	.	.	.	Q	T	I	L	I	G	H	S	L	E	S	D	L	L	A	L	.	.	.	.	.	.	.	.	K	L	I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A	D	Y
Query Conservation																				.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence		.																		.	.	.	.	.																	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation		.																																																												.	.	.	.	.	.	.	.	.
Template Sequence		.	K	L	T	E	R	A	A	E	L	Q	T	L	D	F	L	K	K	W	V	P	K	G	A	S	P	I	C	G	N	S	I	A	Q	D	K	R	F	L	V	K	Y	X	P	D	L	A	D	Y	F	H	Y	R	H	L	D	V	S	T	L	.	.	.	.	.	.	.	.	.	K	E	L	A	A	R	W	K	P	E	I
Template Known Secondary structure		.		B														T	T	T	S		T	T	T	S					S	S																		S	S		S									.	.	.	.	.	.	.	.	.									G	G	G
Template Predicted Secondary structure		.																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
			82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	I	I	Q	D	S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q	R	A	Q	I	Q
Query Conservation
Alig confidence											.	.
Template Conservation											.	.
Template Sequence		L	E	G	F	K	K	E	N	T	.	.	H	L	A	L	D	D	I	R	E	S	I	K	E	L	A	Y	Y	R	E	H	F	X	K	L	D
Template Known Secondary structure		G	G	G							.	.	S																				T
Template Predicted Secondary structure											.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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