Job Description A0PJM3 Confidence 92.29% Date Tue Apr 3 14:51:25 BST 2012 Rank 46 Aligned Residues 155 % Identity 17% Template d1ih7a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.21

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		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420								.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.											.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Y	P	G	I	Y	A	L	D	C	E	M	C	Y	T	T	.	.	.	.	.	.	.	H	G	L	E	L	T	R	V	T	V	V	D	.	A	D	M	R	V	V	Y	D	T	F	.	.	.	.	.	.	.	.	.	.	V	K	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K
Query Conservation																		.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.													.											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	I	R	V	A	N	F	D	I	E	V	T	S	P	D	G	F	P	E	P	S	Q	A	K	H	P	I	D	A	I	T	H	Y	D	S	I	D	D	R	F	Y	V	F	D	L	L	N	S	P	Y	G	N	V	E	E	W	S	I	E	I	A	A	K	L	Q	E	Q	G	G	D	E	V	P	S	E	I	I	D	K
Template Known Secondary structure		G	G	S												S	S	S				T	T	T			S										T	T	T	T											T	T													S		T	T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		467	.					.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.			.	.	.	.	490	.	.	.	.	.		.	.	.	.	500																																						.	.
Predicted Secondary structure				.	.	.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	S	.	.	.	.	I	T	L	P	Q	V	Q	A	I	L	L	S	F	F	S	A	Q	.	.	T	I	L	I	G	H	S	L	E	S	.	D	L	L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L
Query Conservation				.	.	.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																		.	.											.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	Y	M	P	F	D	N	E	K	E	L	L	M	E	Y	L	N	F	W	Q	Q	K	T	P	V	I	L	T	G	W	N	V	E	S	F	D	I	P	Y	V	Y	N	R	I	K	N	I	F	G	E	S	T	A	K	R	L	S	P	H	R	K	T	R	V	K	V	I	E	N	M	Y	G	S	R	E	I	I	T	L
Template Known Secondary structure								S	S															S			S					T	T	T	T	T	T																			G	G	G	S	T	T	S										S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		503	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.		.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.														.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	.	K	R	S	L	R	N	L	A	A	D	Y	L	A	Q	I	I	Q	D	S	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M
Query Conservation																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	I	S	V	L	D	Y	I	D	L	Y	K	K	F	S	F	T	N	Q	P	S	Y	S	L	D	Y	I	S	E	F	E	L	N	V	G	K	L	K	Y	D	G	P	I	S	K	L	R	E	S	N	H	Q	R	Y	I	S	Y	N	I	I	D	V	Y	R	V	L	Q	I	D	A
Template Known Secondary structure		T	T														S	S				S			S									T								S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions