Job Description A0PJM3 Confidence 48.17% Date Tue Apr 3 14:51:25 BST 2012 Rank 69 Aligned Residues 147 % Identity 14% Template c3zyqA_ PDB info PDB header:signaling Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine kinase PDBTitle: crystal structure of the tandem vhs and fyve domains of hepatocyte2 growth factor-regulated tyrosine kinase substrate (hgs-hrs) at 1.483 a resolution Resolution 1.48 Å

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		R	G	Y	L	Q	L	F	T	E	E	C	L	K	F	C	A	S	.	.	K	Q	E	A	E	E	K	A	L	N	E	E	K	V	A	Y	D	C	S	P	N	K	N	R	Y	L	N	V	V	L	N	T	L	K	R	L	K	G	L	T	P	S	S	M	P	G	L	S	R	A	A	L	Y	S	R	L	Q	E	F	L	L
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		A	L	Y	A	L	E	V	M	E	S	V	V	K	N	C	G	Q	T	V	H	D	E	V	A	N	K	Q	T	M	E	E	L	K	D	L	L	K	R	Q	V	E	V	N	V	R	N	K	I	L	Y	L	I	Q	A	W	A	H	A	F	R	N	E	P	K	Y	K	V	V	Q	D	T	Y	Q	I	M	K	V	E	G	H
Template Known Secondary structure																									S	S																																		T	T	T		G	G	G														T
Template Predicted Secondary structure
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		T	Q	D	Q	L	K	E	N	G	Y	P	F	P	H	P	E	R	P	.	.	.	G	G	A	V	L	F	T	G	Q	G	K	G	P	G	D	S	S	C	R	V	C	C	R	C	G	T	E	Y	L	V	S	S	S	G	R	C	V	R	D	Q	L	C	Y	Y	H	W	G	R	V	R	S	S	Q	V	A	G	G	R	V
Query Conservation																				.	.	.
Alig confidence																				.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	F	P	E	F	K	E	S	D	A	M	F	A	A	E	R	A	P	D	W	V	D	A	E	E	C	H	R	C	R	V	Q	F	G	V	M	T	R	K	H	H	C	R	A	C	G	Q	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	K	C	S	S	K	Y	S	T	I	P	K	F	G	I	E	K
Template Known Secondary structure								G	G	G	G														S	B		T	T	T			B		B	T	T	B						T	T	T					.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T								G	G	G	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.														190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		361	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	Y	T	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	R	V	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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