Job Description A0PJM3 Confidence 99.51% Date Tue Apr 3 14:51:25 BST 2012 Rank 7 Aligned Residues 148 % Identity 20% Template c3tr8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:oligoribonuclease; PDBTitle: structure of an oligoribonuclease (orn) from coxiella burnetii Resolution 2.50 Å

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		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.					.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.											.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	Y	A	L	D	C	E	M	C	Y	T	T	H	G	.	.	.	.	L	E	L	T	R	V	T	V	V	D	A	D	M	R	V	V	Y	D	T	F	.	.	.	.	.	.	.	.	.	.	V	K	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q
Query Conservation																	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.							.														.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																											.																																																.
Template Sequence		N	L	I	W	L	D	L	E	X	T	G	L	D	P	E	R	D	R	I	I	E	I	A	T	I	.	V	T	N	S	H	L	D	I	L	A	E	G	P	A	F	A	I	H	Q	P	D	K	L	L	T	A	X	D	N	W	N	T	S	H	H	T	A	S	G	L	L	E	R	V	K	N	S	.	S	V	D	E	V	E
Template Known Secondary structure											S	S	S		T	T	T										.				T	T																				T	T	S											T	S							T		.
Template Predicted Secondary structure																											.																																																.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.
		474	.	.	.	.	.	480	.	.	.						.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.									.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure												.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		V	Q	A	I	L	L	S	F	F	S	.	.	.	.	.	A	Q	T	I	L	I	G	H	S	L	E	S	D	L	L	A	L	K	L	.	.	.	.	.	.	.	.	I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A	D	Y	L	A	Q	I	I	Q	D
Query Conservation												.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.																				.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		A	E	T	L	T	L	A	F	L	E	K	Y	V	S	A	G	K	S	P	L	C	G	N	S	V	C	Q	D	R	R	F	L	S	R	Y	X	P	R	L	N	Q	F	F	H	Y	R	H	L	D	V	T	T	L	K	I	L	.	.	.	.	.	.	.	.	.	A	Q	R	W	A	P	Q	I	A	A	A	H	I	K	E
Template Known Secondary structure											T	T	T	S		T	T		S					S	S	T																		S		S												.	.	.	.	.	.	.	.	.										T	T	S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140										.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q	R	A	Q	I
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		S	Q	.	.	H	L	A	L	Q	D	I	R	D	S	I	E	E	L	R	Y	Y	R	A	H	L	L	N	L
Template Known Secondary structure				.	.	S																				T	S
Template Predicted Secondary structure				.	.
Template SS confidence
		156	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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