 |
| Job Description | A0PJM3 | | Confidence | 53.07% | Date | Tue Apr 3 14:51:25 BST 2012 |
| Rank | 67 | Aligned Residues | 50 |
| % Identity | 16% | Template | c3ho6B_ |
| PDB info |
PDB header:toxin | Chain: B: PDB Molecule:toxin a; |
PDBTitle: structure-function analysis of inositol hexakisphosphate-2 induced autoprocessing in clostridium difficile toxin a
|
| Resolution | 1.60 Å |
|
| | |
426 | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | |
|
. | . | |
. | . | 490 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | |  |
|
|
|
|
| | | | |
|
|
|
|
|
|
|
| | | | | |
|
|
|
|
|
|
|  | | | |
|
|
|
|
|
| | | | | | | | | | | | |
|
|
| . | . |
| | . | | | |
|
| | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
| . |
|
|
|
|
|
|
|
|
|
| Query Sequence | |
T | R | V | T | V | V | D | A | D | M | R | V | V | Y | D | T | F | V | K | P | D | N | E | I | V | D | Y | N | T | R | F | S | G | V | T | E | A | D | V | A | K | T | S | I | T | L | P | Q | V | Q | A | I | L | L | S | F | F | S | A | Q | . |
. |
T | I | . |
L | I | G | H | S | L | E | S | D |
| Query Conservation | |
|
|
|
| |
|
| | |
| |
| | |
| | |
| |
| | | |
| |
|
| |
| | |
|
|
|
| | | |
| | | | | | | | | | | | | |
| | | |
| | | | . | . |
|
| . |
|
|
|
| |
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
| . |
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | | | |
|
|
| |
| | | |
|
| | . | . | . | |
| | | | | | | | | | |
| | |
|
| | |
|
|
|
|
|
|
|
| |
| |
| Template Sequence | |
V | K | V | T | F | I | G | H | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | S | E | F | A | R | L | S | V | D | S | L | S | N | . |
. |
. |
E | I | S | S | F | L | D | T | I | K | L | D | I | S | P | K | N | V | E | V | N | L | L | G | C | N | M | F | S | Y |
| Template Known Secondary structure | |
| | | | | |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S | | | T | T | | | | | | | | | . | . | . | | | | | | | | | | T | T | T |
|
|
| S | | | | | | | | S | S | S |
|
|
| T |
| Template Predicted Secondary structure | |
| | | | | | |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| | | | | | | . | . | . | | | | | | | | | | | | |
|
|
|
|
|
| | | | | | | | |
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
106 | . | . | . | 110 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
