Job Description A0PJM3 Confidence 99.51% Date Tue Apr 3 14:51:25 BST 2012 Rank 8 Aligned Residues 156 % Identity 14% Template c3cm6A_ PDB info PDB header:hydrolase, apoptosis Chain: A: PDB Molecule:cell death-related nuclease 4; PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er Resolution 2.60 Å

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		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.					.	.	.	.	.	.	430	.			.	.	.	.	.	.	.						.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure																		.	.	.	.									.	.								.	.	.	.	.										.	.
Query SS confidence																		.	.	.	.									.	.								.	.	.	.	.										.	.
Query Sequence		G	I	Y	A	L	D	C	E	M	C	Y	T	T	H	G	L	.	.	.	.	E	L	T	R	V	T	V	V	.	.	D	A	D	M	R	V	V	.	.	.	.	.	Y	D	T	F	V	K	P	D	N	.	.	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V
Query Conservation																		.	.	.	.									.	.								.	.	.	.	.										.	.
Alig confidence																		.	.	.	.									.	.								.	.	.	.	.										.	.																				.
Template Conservation																																																																										.
Template Sequence		T	L	L	I	L	D	F	E	T	T	S	D	A	A	N	Q	D	Y	P	C	E	V	I	Q	F	A	I	V	A	Y	D	V	P	N	D	K	I	R	E	D	I	S	F	N	K	Y	V	K	P	V	L	N	R	T	L	T	K	N	C	V	D	F	T	G	I	P	Q	R	S	I	D	T	.	A	D	T	F	D	V	V
Template Known Secondary structure														T	T			S															T	T	T	T													B		S	S			S																		T	.	S		B
Template Predicted Secondary structure																																																																										.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.															.	.	.	.	.	.	.	500	.	.	.	.	.	.	.					.	.	510	.	.	.	.	.	.							.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.										.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.										.	.	.	.	.	.
Query Sequence		Q	A	I	L	L	S	F	F	S	A	Q	T	I	L	I	G	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	S	D	L	L	A	L	K	L	I	H	S	T	V	.	.	.	.	V	D	T	A	V	L	F	P	H	.	.	.	.	.	.	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.										.	.	.	.	.	.
Alig confidence													.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.										.	.	.	.	.	.
Template Conservation													.
Template Sequence		Y	E	Q	F	Q	Q	W	L	I	T	L	.	G	L	E	E	G	K	F	A	F	V	C	D	S	R	Q	D	L	W	R	I	A	Q	Y	Q	M	K	L	S	N	I	Q	M	P	A	F	F	R	Q	Y	I	N	L	Y	K	I	F	T	N	E	M	D	R	M	G	P	K	E	L	S	A	T	T	N	I	G	K	M	N
Template Known Secondary structure													.				T	T	S						S	S	S					T									T	T					G	G	G	S																									S
Template Predicted Secondary structure													.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	Y	L	A	Q	I	I	Q	D	S	Q	D	G	H	N	S	S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q	R	A	Q	I
Query Conservation
Alig confidence		.												.	.
Template Conservation		.												.	.
Template Sequence		.	E	Y	Y	D	L	P	T	I	G	R	A	.	.	H	D	A	M	D	D	C	L	N	I	A	T	I	L	Q	R	M	I	N	M	G	A	K	V
Template Known Secondary structure		.			T	T					S		T	.	.	T																			T	T
Template Predicted Secondary structure		.												.	.
Template SS confidence
			168	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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