Return to main results Retrieve Phyre Job Id

Job DescriptionA0PJM3
Confidence97.21%DateTue Apr 3 14:51:25 BST 2012
Rank29Aligned Residues56
% Identity27%Templatec2yrtA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:chord containing protein-1; PDBTitle: solution structure of the chord domain of human chord-2 containing protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   317..320.... .....330.........340.........350.........360.........370 .........380
Predicted Secondary structure 



..































.......







Query SS confidence 







. .













































. . . . . . .









Query Sequence  SSCRVCCR. . CGTEYLVSSSGRCVRDQLCYYHWGRVRSSQVAGGRVSQYTCCAAAP. . . . . . . GSVGCQVAKQ
Query Conservation       
 
..
   
     
       
 

 
                

    .......   

     
Alig confidence 







..








....

















....










.......









Template Conservation 
    
 
 


  
    ....
    
 



 





.... 
 



 
   

 


 
 


 
 
Template Sequence  GMALLCYNRGCGQRFDPET. . . . NSDDACTYHPGVPVFHDA. . . . LKGWSCCKRRTTDFSDFLSIVGCTKGRH
Template Known Secondary structure  S



STTT


TTT....

TTTB


SS
TT....SSSS
SSTT


SS
B

Template Predicted Secondary structure 











....












....




















Template SS confidence 








































































   7..10.........20..... ....30.........40... ......50.........60.........70.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions