 |
| Job Description | A0PJM3 | | Confidence | 26.24% | Date | Tue Apr 3 14:51:25 BST 2012 |
| Rank | 89 | Aligned Residues | 31 |
| % Identity | 23% | Template | c2lo3A_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:saga-associated factor 73; |
PDBTitle: solution structure of sgf73(59-102) zinc finger domain
|
| Resolution | UNK |
|
|   |   |
300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | P | G | G | A | V | L | F | T | G | Q | G | K | G | P | G | D | S | S | C | R | V | C | C | R | C | G | T | E | Y | L | V | S | S |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |
|
|   |
|
|   |
|
|
|
|   |   |   | . | . | . |   |
|
|
|
|   |   |
|
|
|
|
|   |
|   |
|
| Template Sequence |   |
N | P | N | A | Q | L | I | E | D | P | L | D | K | P | I | . |
. |
. |
Q | Y | R | V | C | E | K | C | G | K | P | L | A | L | T | A |
| Template Known Secondary structure |   |
|
| S | S |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |
| T | T | T |
|
|  |  |  | T | T | T |
| Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|