Job Description A0PJM3 Confidence 98.25% Date Tue Apr 3 14:51:25 BST 2012 Rank 20 Aligned Residues 132 % Identity 16% Template c2e6mA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:werner syndrome atp-dependent helicase homolog; PDBTitle: structure of mouse werner exonuclease domain Resolution 2.00 Å

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		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	Y	A	L	D	C	E	M	C	Y	T	T	H	G	L	E	L	T	R	V	T	V	V	D	A	D	M	R	V	V	Y	D	T	F	V	K	P	D	N	E	I	V	D	Y	N	T	R	F	S	G	V	T	E	A	D	V	A	K	T	S	I	T	L	P	Q	V	Q	A	I	L	L	S	F	F	S	A	Q	T	I
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	V	G	F	D	M	E	W	P	P	P	G	K	R	S	R	V	A	V	I	Q	L	C	V	S	E	S	K	C	Y	L	F	H	I	S	S	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	F	P	Q	G	L	K	M	L	L	E	N	K	S	I
Template Known Secondary structure															S												S	S	S							G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S										T		T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																											.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		488		.	490	.	.	.	.	.	.	.	.	.	500					.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.																.	.	.	.
Predicted Secondary structure			.													.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.													.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	.	I	G	H	S	L	E	S	D	L	L	A	L	.	.	.	.	K	L	I	H	S	T	V	V	D	T	A	V	L	F	P	H	Y	L	G	F	P	Y	K	R	S	L	R	N	L	A	A	D	Y	L	A	Q	I	I	Q	D	S	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	H	N	S
Query Conservation			.													.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.													.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	A	G	V	G	I	E	G	D	Q	W	K	L	L	R	D	F	D	V	K	L	E	S	F	V	E	L	T	D	V	A	N	E	K	L	K	C	A	E	T	W	S	L	N	G	L	V	K	H	V	L	G	K	Q	L	L	K	D	K	S	I	R	C	S	N	W	S	N	F	P	L	T	E	D	Q	K	L	Y	A
Template Known Secondary structure						S	S																		S												T	T																S		B									T	S		T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		548	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	D	A	N	A	C	L	Q	L	V	M	W	K	V	R	Q	R	A
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		A	T	D	A	Y	A	G	L	I	I	Y	Q	.	K	L	G	N	L	G
Template Known Secondary structure														.				T
Template Predicted Secondary structure														.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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