Job Description A0PJM3 Confidence 42.40% Date Tue Apr 3 14:51:25 BST 2012 Rank 71 Aligned Residues 124 % Identity 18% Template c1dvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction Resolution 2.00 Å

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		R	G	Y	L	Q	L	F	T	E	E	C	L	K	F	C	A	S	.	.	K	Q	E	A	E	E	K	A	L	N	E	E	K	V	A	Y	D	C	S	P	N	K	N	R	Y	L	N	V	V	L	N	T	L	K	R	L	K	G	L	T	P	S	S	M	P	G	L	S	R	A	A	L	Y	S	R	L	Q	E	F	L	L
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		S	C	Y	S	L	L	V	L	E	S	I	V	K	N	C	G	A	P	V	H	E	E	V	F	T	K	E	N	C	E	M	F	S	S	F	L	E	S	T	P	H	E	N	V	R	Q	K	M	L	E	L	V	Q	T	W	A	Y	A	F	R	S	S	D	K	Y	Q	A	I	K	D	T	M	T	I	L	K	A	K	G	H
Template Known Secondary structure																S									S	S															S																			T	T	T		S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	D	Q	L	K	E	N	G	Y	P	F	P	H	P	E	R	P	G	G	A	V	L	F	T	G	Q	G	K	G	P	G	D	S	S	C	R	V	C	C	R	C	G	T	E	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	P	E	L	R	E	M	F	T	A	D	T	A	P	N	W	A	D	G	R	V	C	H	R	C	R	V	E	F	T	F	T	N	R	K	H	H	C	R	N	C	G	Q	V	F
Template Known Secondary structure													S									S	B		T	T	T			B			S	S	S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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