Return to main results Retrieve Phyre Job Id

Job DescriptionP46109
Confidence99.86%DateSat Jun 16 10:40:36 BST 2012
Rank86Aligned Residues102
% Identity23%Templatec2hmhA_
PDB info PDB header:cytokine regulatorChain: A: PDB Molecule:suppressor of cytokine signaling 3; PDBTitle: crystal structure of socs3 in complex with gp130(ptyr757)2 phosphopeptide.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70...... ...80...
Predicted Secondary structure 

































.....



Query SS confidence 



































































. . . . .






Query Sequence  SDRSAWYMGPVSRQEAQTRLQGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGDQ. . . . . EFDHLPA
Query Conservation       
      
  
   
     
 



 
        


       
  
             ..... 
 

  
Alig confidence 



































































.....






Template Conservation 
    

 
 


 


 

     
 



 
        


     
 
  
                   
 

  
Template Sequence  LQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHFFTLSVKTQSGTKNLRIQEGGSFSLQSDPRSTQPVPRFDVLK
Template Known Secondary structure  TSSTT

TS
TT

STT
STTB

TT
B
B


TT
SS



B

Template Predicted Secondary structure 







































Template SS confidence 















































































   41........50.........60.........70.........80.........90.........100.........110.........120
 
   84.....90.........100.........110
Predicted Secondary structure 



















Query SS confidence 


























Query Sequence  LLEFYKIHYLDTTTLIEPAPRYPSPPM
Query Conservation 

  
    
       
         
Alig confidence 


























Template Conservation 

  
              
  

 
 
Template Sequence  LVHHYMPPQAYYIYKIPLVLSRPLSSN
Template Known Secondary structure  T













Template Predicted Secondary structure 
















Template SS confidence 


























   123......130.........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions