Return to main results Retrieve Phyre Job Id

Job DescriptionP46109
Confidence99.92%DateSat Jun 16 10:40:36 BST 2012
Rank15Aligned Residues110
% Identity27%Templatec2dlyA_
PDB info PDB header:transferaseChain: A: PDB Molecule:fyn-related kinase; PDBTitle: solution structure of the sh2 domain of murine fyn-related2 kinase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20........ .30.........40.........50.........60.........70..... ..
Predicted Secondary structure 



















..




















.

Query SS confidence 



























. .














































.

Query Sequence  MSSARFDSSDRSAWYMGPVSRQEAQTRL. . QGQRHGMFLVRDSSTCPGDYVLSVSENSRVSHYIINSLPNRRFKIGD. QE
Query Conservation               
      
  
   
..     
 



 
        


       
  
            .  
Alig confidence 



























..














































.

Template Conservation          
    

 
 
 
  

  
       
 



 
        


       
  
     
         
Template Sequence  SSGAEDRSLQAEPWFFGAIKRADAEKQLLYSENQTGAFLIRESESQKGDFSLSVLDEGVVKHYRIRRLDEGGFFLTRRKV
Template Known Secondary structure 



SSGGGGG
SSB
SS

TSSS

TT

SSSSS
SSS

SSS
TT
Template Predicted Secondary structure 











































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   78.80.........90.... .....100.........110
Predicted Secondary structure 






.















Query SS confidence 
















.















Query Sequence  FDHLPALLEFYKIHYLD. TTTLIEPAPRYPSPPM
Query Conservation 
 

  

  
    
 .      
         
Alig confidence 
















.















Template Conservation 
 

 


  
      
   
  
        
Template Sequence  FSTLNEFVNYYTTTSDGLCVKLEKPCLKIQVSGP
Template Known Secondary structure  SSTT

SSSSS


SB




SSS
Template Predicted Secondary structure 

















Template SS confidence 

































   85....90.........100.........110........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions