Return to main results Retrieve Phyre Job Id

Job DescriptionP46109
Confidence99.80%DateSat Jun 16 10:40:36 BST 2012
Rank99Aligned Residues110
% Identity20%Templatec2cr4A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:sh3 domain-binding protein 2; PDBTitle: solution structure of the sh2 domain of human sh3bp2 protein
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.. .......20........ .30.........40....... ..50.........60.........70...
Predicted Secondary structure 










.







......












.





Query SS confidence 










.















. . . . . .


















.

























Query Sequence  SSARFDSSDRS. AWYMGPVSRQEAQTRL. . . . . . QGQRHGMFLVRDSSTCPGD. YVLSVSENSRVSHYIINSLPNRRFKI
Query Conservation             . 
      
  
   
......     
 



 
      .  


       
  
          
Alig confidence 










.















......


















.

























Template Conservation            
          
  
        
    

 



 
    
    

      


  
          
Template Sequence  SGEDYEKVPLPNSVFVNTTESCEVERLFKATSPRGEPQDGLYCIRNSSTKSGKVLVVWDETSNKVRNYRIFEKDSKFYLE
Template Known Secondary structure 





S
SS
TTTB
S


STTS


TT

SSTT
TTTT


TTSS
Template Predicted Secondary structure 






































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   74.....80.........90... ......100.........110.
Predicted Secondary structure 









...

















Query SS confidence 



















. . .

















Query Sequence  GDQEFDHLPALLEFYKIHYL. . . DTTTLIEPAPRYPSPPMG
Query Conservation      
 

  

  
    
...       
          
Alig confidence 



















...

















Template Conservation      
 

 


 

   

       

 
 
    
 

Template Sequence  GEVLFVSVGSMVEHYHTHVLPSHQSLLLRHPYGYTSGPSSG
Template Known Secondary structure  SS
SSTTS

SSSSS



SBSS



TTT
Template Predicted Secondary structure 

























Template SS confidence 








































   86...90.........100.........110.........120......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions