Job Description P46109 Confidence 98.39% Date Sat Jun 16 10:40:36 BST 2012 Rank 299 Aligned Residues 53 % Identity 36% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

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		127	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																											.	.	.	.	.
Query SS confidence														.	.	.	.	.																											.	.	.	.	.
Query Sequence		Y	V	R	T	L	Y	D	F	P	G	N	D	.	.	.	.	.	A	E	D	L	P	F	K	K	G	E	I	L	V	I	I	E	K	P	E	E	Q	W	W	S	A	R	.	.	.	.	.	N	K	D	G	R	V	G	M	I	P	V	P	Y	V	E
Query Conservation														.	.	.	.	.																											.	.	.	.	.
Alig confidence														.	.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P	S	K	R	R	V
Template Known Secondary structure						S	S		B										S	S	B			B		T	T										S	S	S									S	S				S
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions