Job Description Q5BN46 Confidence 1.59% Date Thu Apr 26 09:38:59 BST 2012 Rank 76 Aligned Residues 42 % Identity 21% Template d1mqta_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 3.30

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		14	.	.	.	.	.	20	.	.	.	.	.	.												.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	K	A	T	A	P	P	E	R	T	S	D	.	.	.	.	.	.	.	.	.	.	.	Y	Y	R	V	S	A	D	L	P	G	R	F	N	N	P	G	.	.	.	.	.	.	.	.	.	W	F	R	G	Y	R	T	Q	K	A	V	S	V	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.							.										.	.	.	.	.	.	.	.	.
Template Conservation																																.
Template Sequence		V	P	P	G	G	P	V	P	T	K	V	N	S	Y	S	W	Q	T	S	T	N	P	S	V	F	W	T	E	G	N	.	A	P	P	R	M	S	I	P	F	I	G	I	G	N	A	Y	S	M	F	Y	D	G	W	A	R	F	D	K	Q	G	T	Y
Template Known Secondary structure				T	T	S					S	T	T		G	G	G	G		S	S	S							T	T	S	.												S	S	S	S			S				S	B	S	S	T	T	S		S		B
Template Predicted Secondary structure																																.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions