Phyre 2 alignment of A0PJX8 with c3kwrA

Job Description A0PJX8
Confidence 6.89% Date Thu Apr 26 09:45:40 BST 2012

Rank 82 Aligned Residues 9

% Identity 56% Template c3kwrA_

PDB info PDB header:rna binding protein Chain: A: PDB Molecule:putative rna-binding protein; PDBTitle: crystal structure of putative rna-binding protein (np_785364.1) from2 lactobacillus plantarum at 1.45 a resolution

Resolution 1.45 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	328	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	Q	P	L	P	S	A	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence	S	L	P	P	A	S	D	P	Q
Template Known Secondary structure								G	G
Template Predicted Secondary structure
Template SS confidence
	57	.	.	60	.	.	.	.	.

Download:

Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
Disclaimer
Terms and Conditions