Job Description O43719 Confidence 99.54% Date Wed May 9 18:03:47 BST 2012 Rank 161 Aligned Residues 83 % Identity 25% Template d3begb1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.90

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Sequence		N	R	V	V	V	S	G	L	P	P	S	G	S	W	Q	D	L	K	D	H	M	R	E	A	G	D	V	C	Y	.	.	.	.	.	.	.	.	A	D	V	Y	R	D	.	.	.	.	.	.	G	T	G	V	V	E	F	V	R	K	E	D	M	T	Y	A	V	R	K	L	D	N	T	K	F	R	S	H	E	G	E
Template Known Secondary structure											S	S			T	T							G	G	G	S					.	.	.	.	.	.	.	.					T	T	.	.	.	.	.	.	S							S	S												T	T		B				T	T	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.							.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A	K	F	Q	L	K	G	E	Y	D	A	S	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	Y	I	R	V	K	V	D	G	S	Y	G	R	S	R	S
Template Known Secondary structure				B												S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions