Job Description O43719 Confidence 99.62% Date Wed May 9 18:03:47 BST 2012 Rank 92 Aligned Residues 84 % Identity 26% Template d2u2fa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K
Query Conservation																																														.
Alig confidence																																.	.	.	.	.	.	.	.							.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		A	H	K	L	F	I	G	G	L	P	N	Y	L	N	D	D	Q	V	K	E	L	L	T	S	F	G	P	L	K	A	.	.	.	.	.	.	.	.	F	N	L	V	K	D	S	A	T	G	L	S	K	G	Y	A	F	C	E	Y	V	D	I	N	V	T	D	Q	A	I	A	G	L	N	G	M	Q	L	G	D	K	K
Template Known Secondary structure									T			S	S			S								T	S	S	S					.	.	.	.	.	.	.	.								S	S	S											S	S	S									T	S	S	S				S	S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	E	V	A	K	F	Q	L	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	V	Q	R	A	S	V	G	A	K	N	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions