Job Description O43719 Confidence 99.51% Date Wed May 9 18:03:47 BST 2012 Rank 177 Aligned Residues 85 % Identity 18% Template d2u1aa_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.								.	.	.	.
Template Sequence		A	P	A	Q	P	L	S	E	N	P	P	N	H	I	L	F	L	T	N	L	P	E	E	T	N	E	L	M	L	S	M	L	F	N	Q	F	P	G	F	K	E	.	.	.	.	.	.	.	.	V	R	L	V	P	G	R	.	.	.	.	H	D	I	A	F	V	E	F	D	N	E	V	Q	A	G	A	A	R	D	A
Template Known Secondary structure					S				S	S		S		S									S	S												T	S	T	T				.	.	.	.	.	.	.	.					S	S		.	.	.	.									S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.								.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.									.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		L	D	E	D	E	I	R	.	G	Y	K	L	H	V	E	V	A	K
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		L	Q	G	F	K	I	T	Q	N	N	A	M	K	I	S	F	A	K
Template Known Secondary structure		T	T	T			G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions