Job Description O43719 Confidence 99.63% Date Wed May 9 18:03:47 BST 2012 Rank 77 Aligned Residues 74 % Identity 23% Template d2msta_ SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H
Query Conservation																																												.
Alig confidence																														.	.	.	.	.	.	.	.							.																									.
Template Conservation																														.	.	.	.	.	.	.	.																																.
Template Sequence		K	I	F	V	G	G	L	S	V	N	T	T	V	E	D	V	K	H	Y	F	E	Q	F	G	K	V	D	D	.	.	.	.	.	.	.	.	A	M	L	M	F	D	K	T	T	N	R	H	R	G	F	G	F	V	T	F	E	S	E	D	I	V	E	K	V	C	E	.	I	H	F	H	E	I	N	N	K	M	V	E
Template Known Secondary structure										S	S												T	T	S			S		.	.	.	.	.	.	.	.				B			T	T		T	T	S									S											.		S	S			B	T	T	B
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																																.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180
		213	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	K	K	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions