Job Description O43719 Confidence 99.56% Date Wed May 9 18:03:47 BST 2012 Rank 143 Aligned Residues 76 % Identity 16% Template d2ghpa3 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		132	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	I	T	.	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K
Query Conservation																.
Alig confidence																.																	.	.	.	.	.	.	.	.								.																							.
Template Conservation																																	.	.	.	.	.	.	.	.								.																							.
Template Sequence		G	R	E	I	X	I	R	N	L	S	T	E	L	L	D	E	N	L	L	R	E	S	F	E	G	F	G	S	I	E	K	.	.	.	.	.	.	.	.	I	N	I	P	A	G	Q	.	K	F	N	N	C	C	A	F	X	V	F	E	N	K	D	S	A	E	R	A	L	Q	.	X	N	R	S	L	L	G	N	R	E
Template Known Secondary structure		T	T									T	T	T											G	G	G	S					.	.	.	.	.	.	.	.					S			.												S	S								G	G	.	G	T	T				T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.								.																							.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.									240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	V	S	L	A	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions