Job Description O43719 Confidence 99.57% Date Wed May 9 18:03:47 BST 2012 Rank 137 Aligned Residues 72 % Identity 15% Template d2ghpa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.70

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.					.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.					.	.	.	.	.	.
Template Sequence		E	C	T	L	W	X	T	N	F	P	P	S	Y	T	Q	R	N	I	R	D	L	L	Q	D	I	N	V	V	A	L	.	.	.	.	.	.	.	.	S	I	R	L	.	.	.	.	.	.	P	R	R	F	A	Y	I	D	V	T	S	K	E	D	A	R	Y	C	V	E	K	L	N	G	L	K	I	E	G	Y	T	L
Template Known Secondary structure												T	T													T	T					.	.	.	.	.	.	.	.					.	.	.	.	.	.										S	S												T	T				T	T
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.					.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.	.							150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		212	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	K	V	S	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions