Job Description O43719 Confidence 99.63% Date Wed May 9 18:03:47 BST 2012 Rank 80 Aligned Residues 81 % Identity 21% Template d2f9da1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution 2.50

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	P	E	V	N	R	I	L	Y	I	R	N	L	P	Y	K	I	T	A	E	E	M	Y	D	I	F	G	K	Y	G	P	I	.	.	.	.	.	.	.	.	.	.	R	Q	I	R	V	G	N	T	P	E	T	R	G	T	A	Y	V	V	Y	E	D	I	F	D	A	K	N	A	C	D	H	L	S	G	F	N	V
Template Known Secondary structure				T	T			S						S			T	T												T	T	S			.	.	.	.	.	.	.	.	.	.								S	T	T	T	T	T							S	S												T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		207	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	N	R	Y	L	V	V	L	Y	Y	N
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions