Job Description O43719 Confidence 99.62% Date Wed May 9 18:03:47 BST 2012 Rank 100 Aligned Residues 86 % Identity 17% Template d2cqpa1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		G	A	S	S	G	K	P	G	P	T	I	I	K	V	Q	N	M	P	F	T	V	S	I	D	E	I	L	D	F	F	Y	G	Y	Q	V	I	P	G	.	.	.	.	.	.	.	S	V	C	L	K	Y	N	E	K	G	M	P	T	G	E	A	M	V	A	F	E	S	R	D	E	A	T	A	A	V	I	D	L	N	D
Template Known Secondary structure									S	S							S			T	T										T	T	T	S				T	T	.	.	.	.	.	.	.	T							S	S	S											S												T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		917	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.								.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	R	G	Y	K	L	H	V	E	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	I	G	S	R	K	V	K	L	V	L	G
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		990	.	.	.	.	.	.	.	.	.	1000	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions