Job Description O43719 Confidence 99.61% Date Wed May 9 18:03:47 BST 2012 Rank 113 Aligned Residues 87 % Identity 18% Template d2cqia1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	R
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.
Template Sequence		D	D	G	Q	P	R	T	L	Y	V	G	N	L	S	R	D	V	T	E	V	L	I	L	Q	L	F	S	Q	I	G	P	C	K	.	.	.	.	.	.	.	.	.	S	C	K	M	I	T	E	H	T	S	N	D	P	Y	C	F	V	E	F	Y	E	H	R	D	A	A	A	A	L	A	A	M	N	G	R	K	I	L
Template Known Secondary structure			S										S			T	T														S				.	.	.	.	.	.	.	.	.										S	S									S	S												T	T				T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.										.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	E	V	K	V	N	W	A	T	T	P	S	S	Q	K
Template Known Secondary structure		T											T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions