Job Description O43719 Confidence 99.63% Date Wed May 9 18:03:47 BST 2012 Rank 76 Aligned Residues 90 % Identity 22% Template d2cq4a1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L
Query Conservation																																																												.
Alig confidence																																														.	.	.	.	.	.	.	.							.
Template Conservation																																														.	.	.	.	.	.	.	.
Template Sequence		V	R	E	P	V	D	N	L	S	P	E	E	R	D	A	R	T	V	F	C	M	Q	L	A	A	R	I	R	P	R	D	L	E	D	F	F	S	A	V	G	K	V	R	D	.	.	.	.	.	.	.	.	V	R	I	I	S	D	R	N	S	R	R	S	K	G	I	A	Y	V	E	F	C	E	I	Q	S	V	P	L
Template Known Secondary structure		S	S			S					T	T					T						S			T	T											T	T	T	S					.	.	.	.	.	.	.	.						S			S	S	S										S		G	G	G
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		A	I	G	.	L	T	G	Q	R	L	L	G	V	P	I	I	V	Q	A	S
Template Known Secondary structure					.		T	T				T	T
Template Predicted Secondary structure					.
Template SS confidence
		207	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions