Job Description O43719 Confidence 99.58% Date Wed May 9 18:03:47 BST 2012 Rank 125 Aligned Residues 87 % Identity 23% Template d2cq3a1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.										.
Template Conservation																																										.	.	.	.	.	.	.	.										.
Template Sequence		S	S	G	N	S	E	S	K	S	T	P	K	R	L	H	V	S	N	I	P	F	R	F	R	D	P	D	L	R	Q	M	F	G	Q	F	G	K	I	L	D	.	.	.	.	.	.	.	.	V	E	I	I	F	N	E	R	G	.	S	K	G	F	G	F	V	T	F	E	N	S	A	D	A	D	R	A	R	E	K	L
Template Known Secondary structure						S			S										S			T	T										G	G	G	T	S					.	.	.	.	.	.	.	.							T	T	T	.	T									S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.										.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	T	V	V	E	G	R	K	I	E	V	N	N	A	T
Template Known Secondary structure		T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions