Job Description O43719 Confidence 99.26% Date Wed May 9 18:03:47 BST 2012 Rank 210 Aligned Residues 81 % Identity 16% Template d2cq2a1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	.	R
Query Conservation																																																																																.
Alig confidence																																			.	.	.	.	.	.	.	.							.	.	.	.	.																											.
Template Conservation																																			.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		A	T	Q	S	L	V	V	A	N	G	G	L	G	N	G	V	S	R	N	Q	L	L	P	V	L	E	K	C	G	L	V	D	A	.	.	.	.	.	.	.	.	L	L	M	P	P	N	.	.	.	.	.	K	P	Y	S	F	A	R	Y	R	T	T	E	E	S	K	R	A	Y	V	T	L	N	G	K	E	V	V	D
Template Known Secondary structure				S						T		T	G	G	G	T														S					.	.	.	.	.	.	.	.					T	T	.	.	.	.	.		S							S	S											T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	G	Q	K	I	T	L	Y	L	N	F	V	E	K
Template Known Secondary structure		T	T	S											S
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions