Job Description O43719 Confidence 99.37% Date Wed May 9 18:03:47 BST 2012 Rank 206 Aligned Residues 83 % Identity 16% Template d2cq1a1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E	D	E	I	.
Query Conservation																																																																																	.
Alig confidence																																				.	.	.	.	.	.	.	.							.	.	.	.	.																											.
Template Conservation																																				.	.	.	.	.	.	.	.							.	.	.	.	.
Template Sequence		D	G	A	P	S	R	V	L	H	I	R	K	L	P	G	E	V	T	E	T	E	V	I	A	L	G	L	P	F	G	K	V	T	N	.	.	.	.	.	.	.	.	I	L	M	L	K	G	.	.	.	.	.	K	N	Q	A	F	L	E	L	A	T	E	E	A	A	I	T	M	V	N	Y	Y	S	A	V	T	P	H
Template Known Secondary structure			S	S			S						S			T	T									T	T	T	T	T	S					.	.	.	.	.	.	.	.					T	T	.	.	.	.	.	T	T							S	S														S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.							.	.	.	.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.									.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
			207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G	E
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		L	R	N	Q	P	I	Y	I	Q	Y	S	N	H	K	E	L	K	T
Template Known Secondary structure			T	T									S		S	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions