Job Description O43719 Confidence 99.65% Date Wed May 9 18:03:47 BST 2012 Rank 63 Aligned Residues 85 % Identity 28% Template d2cq0a1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E	L	A	L	K	L	L	D	E
Query Conservation																																																					.
Alig confidence																																							.	.	.	.	.	.	.	.							.
Template Conservation																																							.	.	.	.	.	.	.	.
Template Sequence		P	N	R	R	A	D	D	N	A	T	I	R	V	T	N	L	S	E	D	T	R	E	T	D	L	Q	E	L	F	R	P	F	G	S	I	S	R	.	.	.	.	.	.	.	.	I	Y	L	A	K	D	K	T	T	G	Q	S	K	G	F	A	F	I	S	F	H	R	R	E	D	A	A	R	A	I	A	G	V	S	G
Template Known Secondary structure							S	S	S							S			T	T								T	T	S	T	T	T						.	.	.	.	.	.	.	.							S	S	S		S										S	S											T	T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.									.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	R	G	Y	K	L	H	V	E	V	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	Y	D	H	L	I	L	N	V	E	W	A	K
Template Known Secondary structure					T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions