Job Description O43719 Confidence 99.68% Date Wed May 9 18:03:47 BST 2012 Rank 42 Aligned Residues 98 % Identity 17% Template d2cpza1 SCOP info Ferredoxin-like RNA-binding domain, RBD Canonical RBD Resolution UNK

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		K	R	K	A	E	S	G	W	F	H	V	E	E	D	R	N	T	N	V	Y	V	S	G	L	P	P	D	I	T	V	D	E	F	I	Q	L	M	S	K	F	G	I	I	M	R	D	P	Q	T	E	E	F	K	V	K	L	Y	K	D	.	N	Q	G	N	L	K	G	D	G	L	C	C	Y	L	K	R	E	S	V	E
Query Conservation																																																													.
Alig confidence																																															.	.	.	.	.	.	.	.							.
Template Conservation																																															.	.	.	.	.	.	.	.
Template Sequence		Q	Q	S	I	G	A	A	G	S	Q	K	E	G	P	E	G	A	N	L	F	I	Y	H	L	P	Q	E	F	G	D	Q	D	L	L	Q	M	F	M	P	F	G	N	V	V	S	.	.	.	.	.	.	.	.	A	K	V	F	I	D	K	Q	T	N	L	S	K	C	F	G	F	V	S	Y	D	N	P	V	S	A	Q
Template Known Secondary structure								B	S						S	T	T							S			S	S											G	G	G	S			S		.	.	.	.	.	.	.	.							S	S	S		S										S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.									430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	K	L	L	D	E	D	E	I	R	G	Y	K	L	H	V	E	V	A	K	F	Q	L	K	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	I	Q	S	M	N	G	F	Q	I	G	M	K	R	L	K	V	Q	L	K	R	S	K	N	D	S
Template Known Secondary structure								T	T				T	T											S
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions